FFCP PHASE1:Hg19::chr21:39493574..39493607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16707 | |HGNC=16707 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T75 | |UniProt=Q96T75 | ||
|association_with_transcript=7bp_to_ENST00000357704,ENST00000400477,ENST00000465532,ENST00000469658,ENST00000495344_5end | |association_with_transcript=7bp_to_ENST00000357704,ENST00000400477,ENST00000465532,ENST00000469658,ENST00000495344_5end | ||
|cluster_id=chr21:39493574..39493607,+ | |||
|coexpression_cluster_id=C2631 | |coexpression_cluster_id=C2631 | ||
|description=CAGE_peak_1_at_DSCR8_5end | |description=CAGE_peak_1_at_DSCR8_5end | ||
|id=chr21:39493574..39493607,+ | |id=chr21:39493574..39493607,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.46e-08!7;CL:0000586!3.46e-08!7;CL:0002541!9.99e-08!3;CL:0000064!9.12e-07!3;CL:0005012!9.12e-07!3;CL:0000067!9.12e-07!3;CL:0002304!9.12e-07!3 | |ontology_enrichment_celltype=CL:0000039!3.46e-08!7;CL:0000586!3.46e-08!7;CL:0002541!9.99e-08!3;CL:0000064!9.12e-07!3;CL:0005012!9.12e-07!3;CL:0000067!9.12e-07!3;CL:0002304!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.26e-12;7!CL:0000586;1.26e-12;7!CL:0002541;1.87e-11;3!CL:0000306;1.08e-07;4!CL:0002222;1.08e-07;4!CL:0002224;1.08e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.23e-12,7;CL:0000586,1.23e-12,7;CL:0002541,1.84e-11,3;CL:0000306,1.10e-07,4;CL:0002222,1.10e-07,4;CL:0002224,1.10e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.67e-07!8 | |ontology_enrichment_disease=DOID:1036!4.67e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.96e-08;8!DOID:3095;4.91e-07;22!DOID:2994;4.91e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.16e-09,235;DOID:14566,1.81e-08,239;DOID:0050687,4.64e-08,143;DOID:1036,9.87e-08,8;DOID:3095,4.89e-07,22;DOID:2994,4.89e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000020!6.20e-14!23;UBERON:0001032!3.33e-13!24;UBERON:0004456!3.33e-13!24;UBERON:0000970!5.83e-12!20;UBERON:0002104!2.96e-11!21;UBERON:0007625!1.13e-10!11;UBERON:0000019!1.38e-10!19;UBERON:0000047!1.38e-10!19;UBERON:0004088!1.38e-10!19;UBERON:0003072!1.38e-10!19;UBERON:0003071!1.38e-10!19;UBERON:0004128!1.38e-10!19;UBERON:0001801!3.10e-10!14;UBERON:0001456!2.42e-09!21;UBERON:0000488!1.65e-08!4;UBERON:0000476!9.99e-08!3;UBERON:0000920!9.99e-08!3;UBERON:0001778!9.12e-07!3;UBERON:0001775!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0000020!6.20e-14!23;UBERON:0001032!3.33e-13!24;UBERON:0004456!3.33e-13!24;UBERON:0000970!5.83e-12!20;UBERON:0002104!2.96e-11!21;UBERON:0007625!1.13e-10!11;UBERON:0000019!1.38e-10!19;UBERON:0000047!1.38e-10!19;UBERON:0004088!1.38e-10!19;UBERON:0003072!1.38e-10!19;UBERON:0003071!1.38e-10!19;UBERON:0004128!1.38e-10!19;UBERON:0001801!3.10e-10!14;UBERON:0001456!2.42e-09!21;UBERON:0000488!1.65e-08!4;UBERON:0000476!9.99e-08!3;UBERON:0000920!9.99e-08!3;UBERON:0001778!9.12e-07!3;UBERON:0001775!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000020;3.59e-14;23!UBERON:0001032;1.72e-13;24!UBERON:0004456;1.72e-13;24!UBERON:0003124;1.87e-11;3!UBERON:0000920;1.87e-11;3!UBERON:0000970;4.14e-11;20!UBERON:0002104;1.66e-10;21!UBERON:0001801;4.32e-10;14!UBERON:0007625;9.20e-10;11!UBERON:0000019;2.63e-09;19!UBERON:0000047;2.63e-09;19!UBERON:0004088;2.63e-09;19!UBERON:0010230;2.63e-09;19!UBERON:0001905;2.32e-08;2!UBERON:0002757;2.32e-08;2!UBERON:0010134;2.32e-08;2!UBERON:0005408;2.32e-08;2!UBERON:0001899;2.32e-08;2!UBERON:0001456;2.64e-08;21!UBERON:0010077;1.08e-07;4!UBERON:0005389;1.08e-07;4!UBERON:0000484;1.08e-07;4!UBERON:0000965;1.08e-07;4!UBERON:0001803;1.08e-07;4!UBERON:0000488;1.34e-07;4!UBERON:0000473;3.79e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,1.74e-13,24;UBERON:0001032,1.74e-13,24;UBERON:0004456,1.74e-13,24;UBERON:0000920,1.84e-11,3;UBERON:0000970,1.57e-10,21;UBERON:0002104,1.57e-10,21;UBERON:0001801,3.80e-10,14;UBERON:0007625,8.46e-10,11;UBERON:0000019,8.32e-09,20;UBERON:0000047,8.32e-09,20;UBERON:0010312,8.32e-09,20;UBERON:0004088,8.32e-09,20;UBERON:0010230,8.32e-09,20;UBERON:0003072,8.32e-09,20;UBERON:0004128,8.32e-09,20;UBERON:0003071,8.32e-09,20;UBERON:0001905,2.28e-08,2;UBERON:0002757,2.28e-08,2;UBERON:0010134,2.28e-08,2;UBERON:0005408,2.28e-08,2;UBERON:0001899,2.28e-08,2;UBERON:0003124,2.58e-08,7;UBERON:0001456,6.77e-08,22;UBERON:0010077,1.10e-07,4;UBERON:0005389,1.10e-07,4;UBERON:0000484,1.10e-07,4;UBERON:0002546,1.10e-07,4;UBERON:0000965,1.10e-07,4;UBERON:0001803,1.10e-07,4;UBERON:0003073,1.10e-07,4;UBERON:0005426,1.10e-07,4;UBERON:0000488,1.16e-07,4;UBERON:0000473,3.76e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21418378357831,1.77383517970051,0.966182642624386,5.04269440666194,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.88724591328378,0,0,0,0,0,0,7.21656710126366,1.73895607462615,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0,2.50685348535854,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,4.84292754744295,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5168901511085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35218521685727,0,0.270455678475983,0,0,0.37428108081644,0,9.70884173996108,38.670854344285,0,3.58116727106535,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3743212257634,0,0,0.291604613383254,6.59774980746511,0,0,0,0,0,0.658156191461918,0,0,0.0769502585037971,29.7388765760673,8.76142836674629,32.1332366986984,25.0975429139839,18.8210684241832,12.8236630762607,28.7838779050063,0,0,0,41.5096015535612,32.9385057653802,31.3826367644826,35.4839480194226,0,0,15.507116775119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5228200253109,17.1956594536292,0,0,0,0,0,0,0,0,0,0,2.03382666702479,0,13.1151643723973,0,0,53.7064095685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,6.91203758272767,0,0,0.129282956361551,0,0,0,0,0,0,0,14.8208723923458,0,0,0,0,0,0,10.051462160015,0,0,0,0,0,0.372578417648301,0,0,1.66814029295813,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57745910507589,0,0,0,0,0,0,0.943595651135378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,8.26990781684432,0,18.8572820026624,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,15.5353532404703,36.9912094440706,0,0,10.8216891598419,0,0,0,0,0,0,0,0,0,0,0,0,1.1436247068265,0,0,21.2107092209147,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77844517432141,0,26.7155455691393,0,0,0,0,0,0,0,0,0,0,0,0,9.39446865694332,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,21.0882553889932,27.3668762184704,5.91535212503494,0,0,37.3554233545639,7.65364852004218,18.4895249807763,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0,1.08858373948481,1.36893320434112,0.0673520530145875,0,0,0,14.4081916934916,0,0,0,0,0,0,0,0 | ||
|short_description=p1@DSCR8 | |short_description=p1@DSCR8 | ||
}} | }} |
Latest revision as of 09:26, 18 September 2015
Short description: | p1@DSCR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DSCR8_5end |
Coexpression cluster: | C2631_chronic_pineal_gall_teratocarcinoma_testicular_choriocarcinoma_cholangiocellular |
Association with transcript: | 7bp_to_ENST00000357704, ENST00000400477, ENST00000465532, ENST00000469658, ENST00000495344_5end |
EntrezGene: | NA |
HGNC: | 16707 |
UniProt: | Q96T75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.23e-12 | 7 |
germ cell | 1.23e-12 | 7 |
chorionic membrane mesenchymal stem cell | 1.84e-11 | 3 |
crystallin accumulating cell | 1.10e-07 | 4 |
vertebrate lens cell | 1.10e-07 | 4 |
lens epithelial cell | 1.10e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
sense organ | 1.74e-13 | 24 |
sensory system | 1.74e-13 | 24 |
entire sense organ system | 1.74e-13 | 24 |
egg chorion | 1.84e-11 | 3 |
eye | 1.57e-10 | 21 |
visual system | 1.57e-10 | 21 |
anterior segment of eyeball | 3.80e-10 | 14 |
pigment epithelium of eye | 8.46e-10 | 11 |
camera-type eye | 8.32e-09 | 20 |
simple eye | 8.32e-09 | 20 |
immature eye | 8.32e-09 | 20 |
ocular region | 8.32e-09 | 20 |
eyeball of camera-type eye | 8.32e-09 | 20 |
optic cup | 8.32e-09 | 20 |
optic vesicle | 8.32e-09 | 20 |
eye primordium | 8.32e-09 | 20 |
pineal body | 2.28e-08 | 2 |
regional part of epithalamus | 2.28e-08 | 2 |
secretory circumventricular organ | 2.28e-08 | 2 |
circumventricular organ | 2.28e-08 | 2 |
epithalamus | 2.28e-08 | 2 |
chorion | 2.58e-08 | 7 |
face | 6.77e-08 | 22 |
cuboidal epithelium | 1.10e-07 | 4 |
transparent eye structure | 1.10e-07 | 4 |
simple cuboidal epithelium | 1.10e-07 | 4 |
cranial placode | 1.10e-07 | 4 |
lens of camera-type eye | 1.10e-07 | 4 |
epithelium of lens | 1.10e-07 | 4 |
lens placode | 1.10e-07 | 4 |
lens vesicle | 1.10e-07 | 4 |
atypical epithelium | 1.16e-07 | 4 |
testis | 3.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.16e-09 | 235 |
disease of cellular proliferation | 1.81e-08 | 239 |
cell type cancer | 4.64e-08 | 143 |
chronic leukemia | 9.87e-08 | 8 |
germ cell and embryonal cancer | 4.89e-07 | 22 |
germ cell cancer | 4.89e-07 | 22 |