FFCP PHASE1:Hg19::chr1:47183812..47183848,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:47183812..47183848,- to FFCP PHASE1:Hg19::chr1:47183812..47183848,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9813 | |EntrezGene=9813 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29051 | |HGNC=29051 | ||
|TSSclassifier=strong | |||
|UniProt=O75071 | |UniProt=O75071 | ||
|association_with_transcript=32bp_to_BC002525,BC018842_5end | |||
|cluster_id=chr1:47183812..47183848,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_3_at_KIAA0494_5end | |||
|id=chr1:47183812..47183848,- | |||
|ontology_enrichment_celltype=CL:0002139!2.93e-13!24;CL:0000071!3.88e-10!18;CL:0002546!3.88e-10!18;CL:1000413!2.88e-09!9;CL:0000115!1.82e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.14e-45;24!CL:0000071;4.32e-30;18!CL:1000413;4.03e-28;9!CL:0000115;5.09e-28;36!CL:0002078;1.15e-17;45!CL:0002544;5.72e-17;6!CL:0002138;1.34e-16;6!CL:0000213;9.95e-12;58!CL:0000215;9.95e-12;58!CL:0002545;2.89e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.75e-45,24;CL:0000115,4.85e-32,36;CL:0000071,4.97e-30,18;CL:0002546,4.97e-30,18;CL:1000413,3.93e-28,9;CL:0002078,1.01e-24,45;CL:0000213,3.54e-18,58;CL:0000215,3.54e-18,58;CL:0002544,6.05e-17,6;CL:0005020,7.87e-17,6;CL:0002138,7.87e-17,6;CL:0005022,7.87e-17,6;CL:0002545,3.20e-09,2;CL:0000222,1.92e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;4.32e-30;18!CL:0005022;1.34e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.88e-10!18;UBERON:0004638!3.88e-10!18;UBERON:0004852!3.88e-10!18;UBERON:0003915!2.88e-09!9;UBERON:0004700!2.88e-09!9;UBERON:0001917!2.88e-09!9;UBERON:0007023!1.38e-08!115;UBERON:0000487!3.60e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.32e-30;18!UBERON:0001986;4.32e-30;18!UBERON:0004852;4.32e-30;18!UBERON:0003915;4.03e-28;9!UBERON:0004700;4.03e-28;9!UBERON:0001917;4.03e-28;9!UBERON:0000487;4.02e-24;22!UBERON:0006914;6.71e-21;25!UBERON:0000490;3.90e-17;33!UBERON:0001473;2.24e-12;8!UBERON:0004536;2.24e-12;8!UBERON:0006558;2.24e-12;8!UBERON:0002465;7.75e-10;10!UBERON:0001052;1.87e-09;4!UBERON:0005800;2.89e-09;2!UBERON:0001515;2.89e-09;2!UBERON:0000055;1.89e-08;65!UBERON:0000922;3.69e-08;49!UBERON:0004907;1.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.97e-30,18;UBERON:0001986,4.97e-30,18;UBERON:0004852,4.97e-30,18;UBERON:0003915,3.93e-28,9;UBERON:0004700,3.93e-28,9;UBERON:0001917,3.93e-28,9;UBERON:0000487,4.51e-24,22;UBERON:0006914,7.41e-21,25;UBERON:0000055,4.00e-13,68;UBERON:0001473,1.51e-12,8;UBERON:0004536,1.51e-12,8;UBERON:0006558,1.51e-12,8;UBERON:0001009,6.64e-12,112;UBERON:0004535,4.31e-11,109;UBERON:0002049,6.28e-11,78;UBERON:0007798,6.28e-11,78;UBERON:0002465,5.69e-10,10;UBERON:0004872,7.83e-10,83;UBERON:0001052,1.01e-09,4;UBERON:0005800,3.20e-09,2;UBERON:0001515,3.20e-09,2;UBERON:0004907,7.44e-08,5;UBERON:0007500,2.42e-07,59;UBERON:0001981,2.42e-07,59;UBERON:0004537,2.42e-07,59;UBERON:0006965,2.42e-07,59 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0.670700859703636,1.40648818027883,0.361439152384566,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0.74291500265913,3.37896092523399,0.860234595106124,2.77712401286075,2.26123176769604,2.51699661725944,4.40188867104108,4.80688423034664,4.90991842421725,2.49036383880697,21.4221192169389,10.876391561947,0,19.5249646038536,4.04429388380456,2.43042584364528,1.42879565254528,0.22452937262617,0.788280363383256,0,0,1.09921046358244,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,2.2900814251847,0.653847612453835,0,0,0,0,0.570471821544449,0,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0.482022059766964,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,1.73239737313289,0,1.33177906564219,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0.985326475791887,1.14462964217194,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0.256686072559497,0,1.30139853857622,0,0,0,0.749007023947182,0,0,0.49076596687656,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,4.81239927631679,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.37428108081644,1.17206543417515,0.242721043499027,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.996239941255349,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0.10893846351899,0.139423744278603,0.461701551022782,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0.141353071433941,30.943575483119,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0.234264445725339,0.182454789215666,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0.171986032471617,0.290268993867255,0,0,0.484945082442097,2.91245218081951,0.225980740780532,0,0,0.189932387867636,0.977756913674015,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.687219576995494,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0.717873024576814,0,1.71690419254628,0.223171457441873,1.41085292222125,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.630445658393585,1.67854682031994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.258565912723101,0.66116300871345,0.171086837884329,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0,0,1.08803560673895,6.5179372445902,0.612691153526923,0.327872630709804,0.314108192500469,0,0.610131324509816,0,0,0.443716206147409,0.993542447062135,0,0,0.303298235083296,0.285465333544967,0.235265819698172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| ||
|short_description=p3@KIAA0494 | |||
}} | }} |
Latest revision as of 09:30, 18 September 2015
Short description: | p3@KIAA0494 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIAA0494_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 32bp_to_BC002525, BC018842_5end |
EntrezGene: | KIAA0494 |
HGNC: | 29051 |
UniProt: | O75071 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.75e-45 | 24 |
endothelial cell | 4.85e-32 | 36 |
blood vessel endothelial cell | 4.97e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.97e-30 | 18 |
endothelial cell of artery | 3.93e-28 | 9 |
meso-epithelial cell | 1.01e-24 | 45 |
lining cell | 3.54e-18 | 58 |
barrier cell | 3.54e-18 | 58 |
aortic endothelial cell | 6.05e-17 | 6 |
lymphangioblast | 7.87e-17 | 6 |
endothelial cell of lymphatic vessel | 7.87e-17 | 6 |
vascular lymphangioblast | 7.87e-17 | 6 |
thoracic aorta endothelial cell | 3.20e-09 | 2 |
mesodermal cell | 1.92e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.97e-30 | 18 |
endothelium | 4.97e-30 | 18 |
cardiovascular system endothelium | 4.97e-30 | 18 |
endothelial tube | 3.93e-28 | 9 |
arterial system endothelium | 3.93e-28 | 9 |
endothelium of artery | 3.93e-28 | 9 |
simple squamous epithelium | 4.51e-24 | 22 |
squamous epithelium | 7.41e-21 | 25 |
vessel | 4.00e-13 | 68 |
lymphatic vessel | 1.51e-12 | 8 |
lymph vasculature | 1.51e-12 | 8 |
lymphatic part of lymphoid system | 1.51e-12 | 8 |
circulatory system | 6.64e-12 | 112 |
cardiovascular system | 4.31e-11 | 109 |
vasculature | 6.28e-11 | 78 |
vascular system | 6.28e-11 | 78 |
lymphoid system | 5.69e-10 | 10 |
splanchnic layer of lateral plate mesoderm | 7.83e-10 | 83 |
rectum | 1.01e-09 | 4 |
segment of aorta | 3.20e-09 | 2 |
thoracic aorta | 3.20e-09 | 2 |
lower digestive tract | 7.44e-08 | 5 |
epithelial tube open at both ends | 2.42e-07 | 59 |
blood vessel | 2.42e-07 | 59 |
blood vasculature | 2.42e-07 | 59 |
vascular cord | 2.42e-07 | 59 |