FFCP PHASE1:Hg19::chr10:51371401..51371434,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:51371401..51371434,+
|short_description=p1@TIMM23B
|description=CAGE_peak_1_at_TIMM23B_5end
|association_with_transcript=0bp_to_ENST00000374098,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23581 | |HGNC=23581 | ||
|UniProt=C9JSY4, | |TSSclassifier=strong | ||
|UniProt=C9JSY4,E7EP42 | |||
|association_with_transcript=0bp_to_ENST00000374098,ENST00000429265,ENST00000451577,ENST00000483296,uc001jin.2,uc010qha.1,uc010qhb.1,uc010qhc.1_5end | |||
|cluster_id=chr10:51371401..51371434,+ | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_1_at_TIMM23B_5end | |||
|id=chr10:51371401..51371434,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.44e-24!42;CL:0000860!2.12e-21!45;CL:0000557!4.37e-18!71;CL:0000839!1.13e-17!70;CL:0002009!4.22e-16!65;CL:0000763!4.23e-16!112;CL:0000049!4.23e-16!112;CL:0000766!2.87e-15!76;CL:0002194!1.23e-14!63;CL:0000576!1.23e-14!63;CL:0000040!1.23e-14!63;CL:0000559!1.23e-14!63;CL:0002031!4.81e-14!124;CL:0000738!1.34e-13!140;CL:0000037!1.98e-13!172;CL:0000566!1.98e-13!172;CL:0002032!2.77e-13!165;CL:0000837!2.77e-13!165;CL:0000988!7.80e-12!182;CL:0002087!1.23e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.41e-27;33!CL:0002057;6.41e-27;33!CL:0000473;4.68e-22;39!CL:0000234;4.68e-22;39!CL:0000576;2.24e-16;48!CL:0000766;2.14e-12;69!CL:0000763;2.43e-07;100!CL:0000453;2.65e-07;5!CL:0000197;6.36e-07;6!CL:0000098;6.36e-07;6!CL:0002167;6.36e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.89e-30,42;CL:0002057,1.89e-30,42;CL:0000473,2.21e-30,48;CL:0000234,2.21e-30,48;CL:0000557,1.34e-26,67;CL:0000839,5.03e-26,66;CL:0002009,9.42e-24,61;CL:0000763,4.20e-23,108;CL:0000049,4.20e-23,108;CL:0000766,6.24e-22,72;CL:0002194,1.16e-21,59;CL:0000576,1.16e-21,59;CL:0000040,1.16e-21,59;CL:0000559,1.16e-21,59;CL:0000037,1.66e-14,168;CL:0002031,1.94e-14,120;CL:0000738,3.74e-14,136;CL:0002032,4.99e-14,161;CL:0000837,4.99e-14,161;CL:0000988,7.60e-13,177;CL:0002087,2.06e-09,115;CL:0000453,2.22e-07,5;CL:0000197,4.81e-07,6;CL:0000098,4.81e-07,6;CL:0002167,4.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.85e-22;42!CL:0000049;5.27e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.71e-16!80;UBERON:0004765!6.71e-14!101;UBERON:0001434!6.71e-14!101;UBERON:0001474!1.07e-13!86;UBERON:0001737!1.56e-10!9;UBERON:0002390!4.28e-10!102;UBERON:0003061!4.28e-10!102;UBERON:0002193!6.74e-10!112;UBERON:0002405!1.15e-09!115;UBERON:0002204!1.67e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.55e-13;9!UBERON:0001557;1.55e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.06e-24,76;UBERON:0004765,1.38e-21,90;UBERON:0001474,2.92e-21,82;UBERON:0002405,5.72e-19,93;UBERON:0001434,6.99e-18,100;UBERON:0002390,1.90e-15,98;UBERON:0003061,1.90e-15,98;UBERON:0002193,2.60e-14,108;UBERON:0001737,1.63e-13,9;UBERON:0002204,5.58e-11,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,11.4295274896802,10.2458069764076,10.2243412654232,3.90346239032406,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,1.18009283054671,0.767658796194425,4.33485145285013,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,1.74477886535478,5.29026321164333,2.66842467306598,2.09186133215116,2.87817521615278,4.02618282163635,2.01384674625505,3.84241059793651,4.02019790810595,1.72372840368309,6.45484683583826,6.77132432971709,2.07066573496865,4.91231070104122,6.06753408001728,1.53041946185451,3.85114832491312,3.19668562899521,3.29851300186716,2.59302754908121,7.2458207590558,1.45104619314292,3.97169657283798,2.4912889959823,3.01498398308092,5.73631210262222,3.25783267057675,1.81619850790011,5.15588690382591,6.96217252369946,7.18267973460602,4.03948169933583,6.70907665626803,2.3589012540764,4.20495299956218,5.46466994770072,0.855038231223746,5.9675003159727,5.84525292046829,0,1.09227722252426,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0.954053754535364,0,0,0,2.64342657158052,3.92355994087075,5.26768169550154,0,0,0,6.8546463110178,0.977766799900771,0.946895611469467,1.94826728407911,6.01616467179937,4.12448270464772,5.09527957542329,5.95768500283034,3.20228299314188,2.34106825607781,2.79544437826249,2.76350017785848,3.47763702882063,2.96573126324121,5.61835738988397,5.22677619024884,5.89208582027344,0.383220493601921,1.71813722741315,6.32549230048757,1.27426165729639,2.60433381542567,0.950452044448374,1.95747654801105,0.639933055772092,0,1.18388626022008,1.64225599384209,0,0,0,0,0,6.39312809217652,0,0,0,0,0,0.283604451492204,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,1.14398982156026,3.71457501329565,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42877641334197,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,3.20675031258406,0,0,0,5.33431987502079,0,0,0,0,0,0,0,0.132529768321485,0,0,5.55105871926382,4.74470566798579,0,0,0,0,0,7.33502160247032,11.4637589253109,12.7735845838245,8.82351781859152,7.40790109914181,12.5753428128881,7.41572194880904,9.61485179114196,13.0814033361773,0,0,0,0,0,0,0,0,0,4.11762744716461,0,0,0.100528972411631,0,0,0,1.44331342025273,2.78232971940184,5.16598254637615,0,3.24089858803628,3.61482889245737,0,0,0,0,0,1.87467667973554,10.9188383329259,9.78248170972467,0.0895585227028483,0,0,0,3.34584049250259,2.48793738648926,2.01767934783746,2.27236380167484,3.80987365753014,0,0,0,0,4.80548892550268,3.71574362419752,0.112131084345361,0,0,0,0,4.22651376278,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0,1.2162378064119,6.52934218861764,6.32501818449095,0.239624855491583,0,4.27910715122155,0,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,0,0,0,4.36738809214695,3.92543775353756,1.73472656537328,3.5142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,4.29693525206575,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1555925987561,23.2677551412161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,5.35973392477253,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,4.7325746227337,5.99319150180039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,1.34053759092657,0,7.46630462631478,0,0,0,10.0253790836027,6.77167111206413,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,7.84321467580351,0,0,0,0,0,0.111443384277478,0,4.29740072527842,3.56357616999166,0,2.98244294329889,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54296554325536,0,10.6807215421958,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,3.82801391678303,4.94627004370057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,3.00210144354895,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54275627771164,0,5.78711334474069,3.85110422472255,7.89336642255452,9.89885122826602,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0.544017803369474,1.0027595760908,0.919036730290385,0.983617892129413,0,10.6328181596038,2.44052529803926,0,8.60113793535107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33886732957922,0,0,0,0,0,6.74704668245407,0,7.4647117411354,0,7.30443086536427,0,6.85449381903832,0,0,0,5.10437135866343,5.97143833047924,0.400027764663154,4.46414416737631,5.38799182025471,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,7.59955204473615,4.78313425128107,4.74339643341948,0,0,0,0,0.106691729694141,0,0,0,4.89578277018056,8.70908164046162,0,0,0,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| ||
|short_description=p1@TIMM23B | |||
}} | }} |
Latest revision as of 10:23, 18 September 2015
Short description: | p1@TIMM23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIMM23B_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | 0bp_to_ENST00000374098, ENST00000429265, ENST00000451577, ENST00000483296, uc001jin.2, uc010qha.1, uc010qhb.1, uc010qhc.1_5end |
EntrezGene: | NA |
HGNC: | 23581 |
UniProt: | C9JSY4E7EP42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.89e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-30 | 42 |
defensive cell | 2.21e-30 | 48 |
phagocyte | 2.21e-30 | 48 |
granulocyte monocyte progenitor cell | 1.34e-26 | 67 |
myeloid lineage restricted progenitor cell | 5.03e-26 | 66 |
macrophage dendritic cell progenitor | 9.42e-24 | 61 |
myeloid cell | 4.20e-23 | 108 |
common myeloid progenitor | 4.20e-23 | 108 |
myeloid leukocyte | 6.24e-22 | 72 |
monopoietic cell | 1.16e-21 | 59 |
monocyte | 1.16e-21 | 59 |
monoblast | 1.16e-21 | 59 |
promonocyte | 1.16e-21 | 59 |
hematopoietic stem cell | 1.66e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 1.94e-14 | 120 |
leukocyte | 3.74e-14 | 136 |
hematopoietic oligopotent progenitor cell | 4.99e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.99e-14 | 161 |
hematopoietic cell | 7.60e-13 | 177 |
nongranular leukocyte | 2.06e-09 | 115 |
Langerhans cell | 2.22e-07 | 5 |
receptor cell | 4.81e-07 | 6 |
sensory epithelial cell | 4.81e-07 | 6 |
olfactory epithelial cell | 4.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.06e-24 | 76 |
skeletal element | 1.38e-21 | 90 |
bone element | 2.92e-21 | 82 |
immune system | 5.72e-19 | 93 |
skeletal system | 6.99e-18 | 100 |
hematopoietic system | 1.90e-15 | 98 |
blood island | 1.90e-15 | 98 |
hemolymphoid system | 2.60e-14 | 108 |
larynx | 1.63e-13 | 9 |
musculoskeletal system | 5.58e-11 | 167 |