FFCP PHASE1:Hg19::chr16:89007938..89007955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |EntrezGene=863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |HGNC=1537 | ||
|TSSclassifier=strong | |||
|UniProt=O75081 | |UniProt=O75081 | ||
|association_with_transcript=-330bp_to_NM_175931,uc002fml.1_5end | |association_with_transcript=-330bp_to_NM_175931,uc002fml.1_5end | ||
|cluster_id=chr16:89007938..89007955,- | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_8_at_CBFA2T3_5end | |description=CAGE_peak_8_at_CBFA2T3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000784!3.73e-08!3 | |ontology_enrichment_celltype=CL:0000784!3.73e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.42e-30;3!CL:0002032;1.12e-11;1!CL:0000557;1.12e-11;1!CL:0000451;9.00e-09;10 | |ontology_enrichment_celltype_v019=CL:0000784;1.42e-30;3!CL:0002032;1.12e-11;1!CL:0000557;1.12e-11;1!CL:0000451;9.00e-09;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.35e-30,3;CL:0000451,8.89e-09,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!3.00e-07!51;DOID:0060083!3.00e-07!51 | |ontology_enrichment_disease=DOID:2531!3.00e-07!51;DOID:0060083!3.00e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.23e-07;31!DOID:1240;2.43e-07;39 | |ontology_enrichment_disease_v019=DOID:8692;2.23e-07;31!DOID:1240;2.43e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,9.29e-09,39;DOID:8692,7.45e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.74e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!6.74e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.12e-22;2!UBERON:0005058;9.12e-22;2!UBERON:0009113;9.12e-22;2!UBERON:0004177;2.88e-09;5!UBERON:0005057;2.88e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;9.12e-22;2!UBERON:0005058;9.12e-22;2!UBERON:0009113;9.12e-22;2!UBERON:0004177;2.88e-09;5!UBERON:0005057;2.88e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.30e-11,4;UBERON:0005058,2.30e-11,4;UBERON:0009113,2.30e-11,4;UBERON:0003295,2.30e-11,4;UBERON:0005562,2.30e-11,4;UBERON:0003351,7.32e-08,6;UBERON:0004177,7.46e-07,7;UBERON:0005057,7.46e-07,7 | |||
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| ||
|short_description=p8@CBFA2T3 | |short_description=p8@CBFA2T3 | ||
}} | }} |
Latest revision as of 10:39, 18 September 2015
Short description: | p8@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CBFA2T3_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -330bp_to_NM_175931, uc002fml.1_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.35e-30 | 3 |
dendritic cell | 8.89e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.30e-11 | 4 |
hemolymphoid system gland | 2.30e-11 | 4 |
thymic region | 2.30e-11 | 4 |
pharyngeal gland | 2.30e-11 | 4 |
thymus primordium | 2.30e-11 | 4 |
pharyngeal epithelium | 7.32e-08 | 6 |
hemopoietic organ | 7.46e-07 | 7 |
immune organ | 7.46e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.29e-09 | 39 |
myeloid leukemia | 7.45e-08 | 31 |