FFCP PHASE1:Hg19::chr11:58318567..58318579,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:58318567..58318579,-
|short_description=p7@LPXN
|description=CAGE_peak_7_at_LPXN_5end
|association_with_transcript=125bp_to_uc010rkl.1_5end
|EntrezGene=9...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9404 | |EntrezGene=9404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14061 | |HGNC=14061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_uc010rkl.1_5end | |||
|cluster_id=chr11:58318567..58318579,- | |||
|description=CAGE_peak_7_at_LPXN_5end | |||
|id=chr11:58318567..58318579,- | |||
|ontology_enrichment_celltype=CL:0002057!5.66e-23!42;CL:0000860!1.51e-20!45;CL:0002009!4.30e-16!65;CL:0002194!7.49e-16!63;CL:0000576!7.49e-16!63;CL:0000040!7.49e-16!63;CL:0000559!7.49e-16!63;CL:0002087!2.35e-15!119;CL:0002031!3.88e-14!124;CL:0000557!1.39e-13!71;CL:0000839!6.02e-13!70;CL:0002032!3.71e-12!165;CL:0000837!3.71e-12!165;CL:0000738!3.92e-12!140;CL:0000037!6.32e-12!172;CL:0000566!6.32e-12!172;CL:0000988!1.25e-11!182;CL:0000766!1.37e-11!76;CL:0000763!2.90e-10!112;CL:0000049!2.90e-10!112;CL:0000134!9.02e-08!358;CL:0000723!1.68e-07!436;CL:0000048!2.11e-07!430;CL:0002320!4.18e-07!365;CL:0000034!8.29e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.77e-79;33!CL:0002057;5.77e-79;33!CL:0000473;2.29e-61;39!CL:0000234;2.29e-61;39!CL:0000576;1.07e-40;48!CL:0000766;5.00e-20;69!CL:0000763;2.53e-12;100!CL:0002087;7.15e-10;104!CL:0000738;1.55e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.21e-70,48;CL:0000234,5.21e-70,48;CL:0000860,5.55e-69,42;CL:0002057,5.55e-69,42;CL:0002194,8.36e-55,59;CL:0000576,8.36e-55,59;CL:0000040,8.36e-55,59;CL:0000559,8.36e-55,59;CL:0002009,7.66e-53,61;CL:0000839,1.90e-48,66;CL:0000557,1.20e-47,67;CL:0000766,5.72e-44,72;CL:0002087,1.56e-27,115;CL:0000763,1.90e-27,108;CL:0000049,1.90e-27,108;CL:0002031,3.86e-26,120;CL:0000738,2.32e-22,136;CL:0002032,5.96e-18,161;CL:0000837,5.96e-18,161;CL:0000037,5.96e-17,168;CL:0000988,8.81e-16,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.16e-49;42!CL:0000049;5.08e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-13!102;UBERON:0003061!3.17e-13!102;UBERON:0002193!2.37e-12!112;UBERON:0002371!3.02e-11!80;UBERON:0001474!1.38e-09!86;UBERON:0002405!6.89e-09!115;UBERON:0004765!6.72e-08!101;UBERON:0001434!6.72e-08!101;UBERON:0003081!1.96e-07!216;UBERON:0002384!8.09e-07!375;UBERON:0002204!8.53e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.27e-41,76;UBERON:0001474,6.08e-38,82;UBERON:0004765,4.49e-34,90;UBERON:0002390,2.08e-33,98;UBERON:0003061,2.08e-33,98;UBERON:0002405,8.56e-33,93;UBERON:0001434,4.22e-30,100;UBERON:0002193,8.99e-30,108;UBERON:0002204,6.52e-22,167;UBERON:0003081,2.92e-18,203;UBERON:0000926,3.19e-11,315;UBERON:0004120,3.19e-11,315;UBERON:0006603,3.19e-11,315 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.550975469195755,0,0,0.154816123316076,0.919421224478927,1.50602959389125,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,1.01778767145695,0,1.21292030593908,2.09186133215116,1.6446715520873,2.47765096716083,3.45230870786581,0.768482119587302,1.6553756092201,0.344745680736619,0,1.35426486594342,2.07066573496865,5.18521685109907,1.79778787556068,4.89734227793444,1.60464513538047,3.19668562899521,1.64925650093358,3.19141852194611,1.27867425159808,4.35313857942876,0,2.4912889959823,1.7587406567972,4.69334626578181,1.73751075764093,1.21079900526674,2.20966581592539,2.84816148696796,0.422510572623884,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0.570025487482497,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,1.02800749499755,0.501559486172034,0,0,0,1.22551502573691,0,0.664601683750863,0.270803863765016,1.0247305578054,0.780356085359269,0.822189523018381,0.829050053357545,0.289803085735052,0.296573126324121,0.535081656179426,0,0.339928028092699,0,0,0,0.318565414324097,0,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.809364721840658,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.445893486866185,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.579125226670317,0.205476322550383,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0,0,0,0,0,0,1.54209693802656,0.532685175939381,0.164254312027618,1.03850885836724,0.581051892299796,0,3.00759705454927,0.0920809889358963,0,0.546273504020151,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0,0,0,1.39453664789186,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0.243713489631284,2.11300293513511,0,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,3.26672954583968,0,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,1.58625035258854,0,0,0.245040215981032,0,0,0.142283686696828,0,0.199579371432817,0.5745161103971,0.211673582723883,0,0.561594356226918,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0.494411622680279,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.121499113316049,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0.979762080328227,0,0,0.340776043570843,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.447764408660622,0.701139929541673,0,0,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0.295710299979268,0.318593534327405,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0.545545977607678,0.214821114084977,0.928067519756987,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0.926089897295336,0,0,0,0,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0,0,0,0,0.127762427639595,0,0,0,0,0,0.460935950223117,0,0,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0,0,0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| ||
|short_description=p7@LPXN | |||
}} | }} |
Latest revision as of 11:04, 18 September 2015
Short description: | p7@LPXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LPXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_uc010rkl.1_5end |
EntrezGene: | LPXN |
HGNC: | 14061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.21e-70 | 48 |
phagocyte | 5.21e-70 | 48 |
classical monocyte | 5.55e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.55e-69 | 42 |
monopoietic cell | 8.36e-55 | 59 |
monocyte | 8.36e-55 | 59 |
monoblast | 8.36e-55 | 59 |
promonocyte | 8.36e-55 | 59 |
macrophage dendritic cell progenitor | 7.66e-53 | 61 |
myeloid lineage restricted progenitor cell | 1.90e-48 | 66 |
granulocyte monocyte progenitor cell | 1.20e-47 | 67 |
myeloid leukocyte | 5.72e-44 | 72 |
nongranular leukocyte | 1.56e-27 | 115 |
myeloid cell | 1.90e-27 | 108 |
common myeloid progenitor | 1.90e-27 | 108 |
hematopoietic lineage restricted progenitor cell | 3.86e-26 | 120 |
leukocyte | 2.32e-22 | 136 |
hematopoietic oligopotent progenitor cell | 5.96e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.96e-18 | 161 |
hematopoietic stem cell | 5.96e-17 | 168 |
hematopoietic cell | 8.81e-16 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.27e-41 | 76 |
bone element | 6.08e-38 | 82 |
skeletal element | 4.49e-34 | 90 |
hematopoietic system | 2.08e-33 | 98 |
blood island | 2.08e-33 | 98 |
immune system | 8.56e-33 | 93 |
skeletal system | 4.22e-30 | 100 |
hemolymphoid system | 8.99e-30 | 108 |
musculoskeletal system | 6.52e-22 | 167 |
lateral plate mesoderm | 2.92e-18 | 203 |
mesoderm | 3.19e-11 | 315 |
mesoderm-derived structure | 3.19e-11 | 315 |
presumptive mesoderm | 3.19e-11 | 315 |