FFCP PHASE1:Hg19::chr2:74757050..74757143,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:74757050..74757143,+ to FFCP PHASE1:Hg19::chr2:74757050..74757143,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27429 | |EntrezGene=27429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14348 | |HGNC=14348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000352222_5end | |||
|cluster_id=chr2:74757050..74757143,+ | |||
|description=CAGE_peak_1_at_HTRA2_5end | |||
|id=chr2:74757050..74757143,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.34e-26!254;CL:0000220!1.06e-14!246;CL:0002321!3.57e-14!248;CL:0000115!8.12e-10!35;CL:0002078!7.45e-09!44;CL:0000213!8.70e-08!57;CL:0000215!8.70e-08!57;CL:1000449!1.60e-07!16;CL:0002139!4.13e-07!24;CL:0000071!5.58e-07!18;CL:0002546!5.58e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.13e-08;36!CL:1000449;9.62e-08;15!CL:0002139;2.96e-07;24!CL:0000071;4.28e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.59e-26,253;CL:0002321,1.67e-14,250;CL:0000115,3.27e-10,36;CL:0002078,3.20e-09,45;CL:0000213,4.08e-08,58;CL:0000215,4.08e-08,58;CL:1000449,8.83e-08,15;CL:0002139,4.13e-07,24;CL:0000071,5.58e-07,18;CL:0002546,5.58e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;4.28e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.53e-12!312;UBERON:0000483!3.07e-12!309;UBERON:0001048!7.74e-10!168;UBERON:0000481!1.16e-09!347;UBERON:0000064!2.00e-09!219;UBERON:0003104!6.92e-09!238;UBERON:0009142!6.92e-09!238;UBERON:0005177!9.88e-09!107;UBERON:0000477!3.62e-08!286;UBERON:0004119!4.02e-08!169;UBERON:0000925!4.02e-08!169;UBERON:0006595!4.02e-08!169;UBERON:0001008!8.87e-08!45;UBERON:0002100!9.69e-08!216;UBERON:0006554!1.51e-07!44;UBERON:0004211!1.60e-07!16;UBERON:0001285!1.60e-07!16;UBERON:0007684!1.60e-07!16;UBERON:0003220!1.60e-07!16;UBERON:0004208!1.60e-07!16;UBERON:0009569!2.05e-07!113;UBERON:0008947!2.43e-07!38;UBERON:0003258!2.43e-07!38;UBERON:0000475!2.60e-07!365;UBERON:0000063!4.80e-07!97;UBERON:0001986!5.58e-07!18;UBERON:0004638!5.58e-07!18;UBERON:0004852!5.58e-07!18;UBERON:0003914!5.98e-07!118;UBERON:0001041!6.43e-07!98;UBERON:0000077!7.74e-07!130;UBERON:0006555!7.99e-07!17;UBERON:0005103!7.99e-07!17;UBERON:0000083!7.99e-07!17;UBERON:0009201!7.99e-07!17;UBERON:0004819!7.99e-07!17;UBERON:0006553!7.99e-07!17;UBERON:0003074!7.99e-07!17;UBERON:0003060!7.99e-07!17;UBERON:0000466!8.14e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;9.22e-09;30!UBERON:0001008;9.22e-09;30!UBERON:0006555;9.62e-08;15!UBERON:0004819;9.62e-08;15!UBERON:0001285;9.62e-08;15!UBERON:0007684;9.62e-08;15!UBERON:0000353;1.84e-07;15!UBERON:0000072;3.34e-07;37!UBERON:0004638;4.28e-07;18!UBERON:0001986;4.28e-07;18!UBERON:0004852;4.28e-07;18!UBERON:0002113;6.88e-07;24!UBERON:0011143;6.88e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.14e-12,309;UBERON:0000483,3.80e-12,306;UBERON:0001048,1.69e-09,160;UBERON:0005177,5.54e-09,101;UBERON:0001008,9.41e-09,48;UBERON:0006554,1.61e-08,47;UBERON:0002100,1.63e-08,199;UBERON:0004211,8.83e-08,15;UBERON:0009773,8.83e-08,15;UBERON:0001231,8.83e-08,15;UBERON:0001285,8.83e-08,15;UBERON:0007684,8.83e-08,15;UBERON:0004208,8.83e-08,15;UBERON:0004119,1.11e-07,160;UBERON:0000925,1.11e-07,160;UBERON:0006595,1.11e-07,160;UBERON:0000353,1.29e-07,15;UBERON:0009569,1.62e-07,112;UBERON:0008947,2.43e-07,38;UBERON:0003258,2.43e-07,38;UBERON:0006555,5.01e-07,16;UBERON:0004819,5.01e-07,16;UBERON:0004638,5.58e-07,18;UBERON:0001986,5.58e-07,18;UBERON:0004852,5.58e-07,18;UBERON:0003914,6.07e-07,117;UBERON:0001041,7.13e-07,87 | |||
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| ||
|short_description=p1@HTRA2 | |||
}} | }} |
Latest revision as of 11:54, 18 September 2015
Short description: | p1@HTRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTRA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000352222_5end |
EntrezGene: | HTRA2 |
HGNC: | 14348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.59e-26 | 253 |
embryonic cell | 1.67e-14 | 250 |
endothelial cell | 3.27e-10 | 36 |
meso-epithelial cell | 3.20e-09 | 45 |
lining cell | 4.08e-08 | 58 |
barrier cell | 4.08e-08 | 58 |
epithelial cell of nephron | 8.83e-08 | 15 |
endothelial cell of vascular tree | 4.13e-07 | 24 |
blood vessel endothelial cell | 5.58e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.58e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.14e-12 | 309 |
epithelium | 3.80e-12 | 306 |
primordium | 1.69e-09 | 160 |
trunk region element | 5.54e-09 | 101 |
renal system | 9.41e-09 | 48 |
urinary system structure | 1.61e-08 | 47 |
trunk | 1.63e-08 | 199 |
nephron epithelium | 8.83e-08 | 15 |
renal tubule | 8.83e-08 | 15 |
nephron tubule | 8.83e-08 | 15 |
nephron | 8.83e-08 | 15 |
uriniferous tubule | 8.83e-08 | 15 |
nephrogenic mesenchyme | 8.83e-08 | 15 |
endoderm-derived structure | 1.11e-07 | 160 |
endoderm | 1.11e-07 | 160 |
presumptive endoderm | 1.11e-07 | 160 |
parenchyma | 1.29e-07 | 15 |
subdivision of trunk | 1.62e-07 | 112 |
respiratory primordium | 2.43e-07 | 38 |
endoderm of foregut | 2.43e-07 | 38 |
excretory tube | 5.01e-07 | 16 |
kidney epithelium | 5.01e-07 | 16 |
blood vessel endothelium | 5.58e-07 | 18 |
endothelium | 5.58e-07 | 18 |
cardiovascular system endothelium | 5.58e-07 | 18 |
epithelial tube | 6.07e-07 | 117 |
foregut | 7.13e-07 | 87 |