FFCP PHASE1:Hg19::chr3:4793297..4793312,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:4793297..4793312,- to FFCP PHASE1:Hg19::chr3:4793297..4793312,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100126791 | |EntrezGene=100126791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37129 | |HGNC=37129 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000414938,NR_004428,uc003bqd.2_5end | |||
|cluster_id=chr3:4793297..4793312,- | |||
|description=CAGE_peak_1_at_EGOT_5end | |||
|id=chr3:4793297..4793312,- | |||
|ontology_enrichment_celltype=CL:1000497!5.95e-10!18;CL:0002518!5.95e-10!18;CL:1000507!5.53e-09!12;CL:1000494!5.53e-09!12;CL:1000449!2.24e-08!16;CL:0002057!4.04e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.14e-11;5!CL:0000860;3.73e-11;33!CL:0002057;3.73e-11;33!CL:1000497;1.21e-10;17!CL:0002518;1.21e-10;17!CL:1000449;6.93e-08;15!CL:0000244;1.05e-07;4!CL:0000731;1.05e-07;4!CL:1000507;1.74e-07;10!CL:1000494;1.74e-07;10!CL:0000473;2.19e-07;39!CL:0000234;2.19e-07;39!CL:0002166;7.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.10e-11,5;CL:1000497,1.32e-10,17;CL:0002518,1.32e-10,17;CL:0000860,1.76e-09,42;CL:0002057,1.76e-09,42;CL:0000557,8.62e-09,67;CL:0000244,4.27e-08,4;CL:0000731,4.27e-08,4;CL:0000473,8.92e-08,48;CL:0000234,8.92e-08,48;CL:1000449,9.33e-08,15;CL:1000507,1.80e-07,10;CL:1000494,1.80e-07,10;CL:0002166,4.48e-07,3;CL:0002009,5.79e-07,61;CL:0000839,6.04e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.70e-07;10!UBERON:0007687;1.70e-07;10!CL:0002057;5.46e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!6.86e-12!45;UBERON:0000489!1.56e-11!32;UBERON:0006554!1.83e-11!44;UBERON:0002113!7.68e-11!27;UBERON:0003918!7.68e-11!27;UBERON:0005095!7.68e-11!27;UBERON:0007687!7.68e-11!27;UBERON:0003887!2.41e-10!21;UBERON:0000058!3.34e-10!26;UBERON:0000080!4.44e-10!18;UBERON:0002120!4.44e-10!18;UBERON:0004875!4.44e-10!18;UBERON:0005721!4.44e-10!18;UBERON:0005754!4.44e-10!18;UBERON:0007297!4.44e-10!18;UBERON:0004876!5.61e-10!20;UBERON:0006555!3.03e-09!17;UBERON:0005103!3.03e-09!17;UBERON:0000083!3.03e-09!17;UBERON:0009201!3.03e-09!17;UBERON:0004819!3.03e-09!17;UBERON:0006553!3.03e-09!17;UBERON:0003074!3.03e-09!17;UBERON:0003060!3.03e-09!17;UBERON:0009773!5.53e-09!12;UBERON:0001231!5.53e-09!12;UBERON:0004810!5.53e-09!12;UBERON:0003064!1.92e-08!37;UBERON:0004211!2.24e-08!16;UBERON:0001285!2.24e-08!16;UBERON:0007684!2.24e-08!16;UBERON:0003220!2.24e-08!16;UBERON:0004208!2.24e-08!16;UBERON:0003103!7.08e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.95e-16;30!UBERON:0001008;7.95e-16;30!UBERON:0002113;2.88e-12;24!UBERON:0011143;2.88e-12;24!UBERON:0000489;1.43e-09;29!UBERON:0006555;6.93e-08;15!UBERON:0004819;6.93e-08;15!UBERON:0001285;6.93e-08;15!UBERON:0007684;6.93e-08;15!UBERON:0006947;1.61e-07;3!UBERON:0004054;1.61e-07;3!UBERON:0004211;1.74e-07;10!UBERON:0009773;1.74e-07;10!UBERON:0001231;1.74e-07;10!UBERON:0004810;1.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.83e-15,47;UBERON:0002113,2.61e-15,26;UBERON:0003918,2.61e-15,26;UBERON:0011143,2.61e-15,26;UBERON:0005095,2.61e-15,26;UBERON:0007687,2.61e-15,26;UBERON:0001008,5.19e-15,48;UBERON:0000489,3.63e-12,31;UBERON:0006555,2.78e-09,16;UBERON:0004819,2.78e-09,16;UBERON:0002405,2.02e-08,93;UBERON:0004211,9.33e-08,15;UBERON:0009773,9.33e-08,15;UBERON:0001231,9.33e-08,15;UBERON:0001285,9.33e-08,15;UBERON:0007684,9.33e-08,15;UBERON:0004208,9.33e-08,15;UBERON:0006947,1.41e-07,3;UBERON:0004054,1.41e-07,3;UBERON:0004810,1.80e-07,10;UBERON:0004765,1.88e-07,90;UBERON:0002371,3.95e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.376627918784408,14.2128934691189,13.546597259241,11.2556417278561,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0.587200878669695,1.10799081706375,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0.929716147622738,2.05583944010913,0.309706370895104,0.28769239232215,1.5369642391746,1.89185783910868,2.41321976515633,9.68227025375739,10.8341189275473,0.564727018627814,0,0.674170453335254,2.44867113896722,3.53021929783703,3.83602275479425,0,0.199463657621632,0,1.7412554317715,2.8369261234557,1.24564449799115,0,0.521482918420201,1.73751075764093,1.21079900526674,6.62899744777616,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,2.64342657158052,3.36305137788922,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0.661743720148475,0.665188192387692,0.175669571386252,3.47094550068939,0,0,0,0,0.398873881556595,0,0,0,0.596287222100115,0,0.694281003215189,0,0.419499436209906,0.825354125820202,0,0.775250277507987,0.71153252537342,2.67776490211736,0.805658634218294,0,0.24406205754817,0,4.86085168729056,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,2.1349799145941,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,2.72746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0.866198686566443,0.462985512576611,0,0,0,0,0.234004265139238,0,1.87467667973554,12.4306774867156,2.69372684760534,0,0,0,0,0.088048434013226,8.9151089682532,5.33243827642757,4.29224273649692,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,1.60405176242628,0.184161977871793,0,0,0,4.51199612907412,17.2514355113889,0.784349769176855,1.46139224653261,24.0657713875757,0,0.680374821106063,1.0795795805107,0,0.270946437543853,0.501689773854853,4.33289664176565,6.64860807142979,0.895499018888713,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.768760269460425,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,1.72202149068492,1.68471475667626,1.7737206141467,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.399158742865633,0.383010740264733,0,0,1.68478306868075,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0,0,0,0.796991953004279,1.65770349318689,0,0.102268682502155,6.89274910581989,0,0.179736702294654,2.32727527078292,0,0.789147245095469,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,1.07730361905316,0.113942055847001,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,14.7698645169619,1.63232808159148,0,0,0,0,1.83309043480088,0,0,0,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,2.76209081994573,2.41981432097328,0,0.126373159256976,4.66002600184927,0,0,0,0,0,1.42304773014896,0,0,0.293977192243133,0.261177619741208,24.1122802174002,0,0,0,0,5.33439590686307,0,1.58186518546373,0,0,0.0633107959558787,0.782205530939212,0.0801588202515337,0.640358984218058,0,0.144090417154106,0,0,0.288109595976299,0,0.942776138467182,1.22313785466253,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,11.248694577575,19.3450488639487,0,0,6.22565087663666,7.50100610330473,0,0,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,0,0,0.13223260174269,0,0,0.747511887973863,1.10043013569766,0.828478110694391,0,0,0,0,2.1760712134779,1.5041393641362,1.83807346058077,1.63936315354902,0,0,0,0,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.63718706865481,0,0.155262956876259,0,0.797525143673985,0.521745061811734,1.20206087197775,0,1.62748293281865,0.545545977607678,0.966695013382396,0,1.19428766609585,0,0,0,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0.926089897295336,0.244736704506468,0.71635536432595,0.308801447160972,0,0,1.54331230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| ||
|short_description=p1@EGOT | |||
}} | }} |
Latest revision as of 13:11, 18 September 2015
Short description: | p1@EGOT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EGOT_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000414938, NR_004428, uc003bqd.2_5end |
EntrezGene: | EGOT |
HGNC: | 37129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.10e-11 | 5 |
kidney cell | 1.32e-10 | 17 |
kidney epithelial cell | 1.32e-10 | 17 |
classical monocyte | 1.76e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-09 | 42 |
granulocyte monocyte progenitor cell | 8.62e-09 | 67 |
transitional epithelial cell | 4.27e-08 | 4 |
urothelial cell | 4.27e-08 | 4 |
defensive cell | 8.92e-08 | 48 |
phagocyte | 8.92e-08 | 48 |
epithelial cell of nephron | 9.33e-08 | 15 |
kidney tubule cell | 1.80e-07 | 10 |
nephron tubule epithelial cell | 1.80e-07 | 10 |
epithelial cell of Malassez | 4.48e-07 | 3 |
macrophage dendritic cell progenitor | 5.79e-07 | 61 |
myeloid lineage restricted progenitor cell | 6.04e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.83e-15 | 47 |
kidney | 2.61e-15 | 26 |
kidney mesenchyme | 2.61e-15 | 26 |
upper urinary tract | 2.61e-15 | 26 |
kidney rudiment | 2.61e-15 | 26 |
kidney field | 2.61e-15 | 26 |
renal system | 5.19e-15 | 48 |
cavitated compound organ | 3.63e-12 | 31 |
excretory tube | 2.78e-09 | 16 |
kidney epithelium | 2.78e-09 | 16 |
immune system | 2.02e-08 | 93 |
nephron epithelium | 9.33e-08 | 15 |
renal tubule | 9.33e-08 | 15 |
nephron tubule | 9.33e-08 | 15 |
nephron | 9.33e-08 | 15 |
uriniferous tubule | 9.33e-08 | 15 |
nephrogenic mesenchyme | 9.33e-08 | 15 |
male genital duct | 1.41e-07 | 3 |
internal male genitalia | 1.41e-07 | 3 |
nephron tubule epithelium | 1.80e-07 | 10 |
skeletal element | 1.88e-07 | 90 |
bone marrow | 3.95e-07 | 76 |