FFCP PHASE1:Hg19::chr1:53387352..53387384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55268 | |EntrezGene=55268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23408 | |HGNC=23408 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0R2,B4DSN9,Q8WY60 | |UniProt=F5H0R2,B4DSN9,Q8WY60 | ||
|association_with_transcript=0bp_to_ENST00000371520,ENST00000541281,uc001cun.2,uc010onm.1_5end | |association_with_transcript=0bp_to_ENST00000371520,ENST00000541281,uc001cun.2,uc010onm.1_5end | ||
|cluster_id=chr1:53387352..53387384,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_ECHDC2_5end | |description=CAGE_peak_2_at_ECHDC2_5end | ||
|id=chr1:53387352..53387384,- | |id=chr1:53387352..53387384,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.51e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-22!115;UBERON:0000481!2.31e-12!347;UBERON:0004111!2.87e-11!241;UBERON:0000466!7.19e-11!126;UBERON:0004119!1.92e-10!169;UBERON:0000925!1.92e-10!169;UBERON:0006595!1.92e-10!169;UBERON:0009569!4.01e-10!113;UBERON:0003103!8.11e-10!69;UBERON:0005177!1.90e-09!107;UBERON:0000477!2.37e-09!286;UBERON:0004921!2.99e-09!129;UBERON:0004185!2.99e-09!129;UBERON:0002417!3.01e-09!61;UBERON:0000916!3.01e-09!61;UBERON:0001007!3.13e-09!155;UBERON:0001555!3.13e-09!155;UBERON:0007026!3.13e-09!155;UBERON:0000475!4.45e-09!365;UBERON:0002530!5.70e-09!59;UBERON:0000483!9.49e-09!309;UBERON:0000025!9.58e-09!194;UBERON:0000949!1.04e-08!45;UBERON:0005172!1.97e-08!55;UBERON:0005173!1.97e-08!55;UBERON:0000119!2.57e-08!312;UBERON:0001048!3.32e-08!168;UBERON:0002368!4.94e-08!35;UBERON:0000464!8.11e-08!104;UBERON:0002553!1.56e-07!70;UBERON:0000077!1.95e-07!130;UBERON:0005911!4.15e-07!82;UBERON:0003929!6.17e-07!54;UBERON:0000062!7.37e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!1.62e-22!115;UBERON:0000481!2.31e-12!347;UBERON:0004111!2.87e-11!241;UBERON:0000466!7.19e-11!126;UBERON:0004119!1.92e-10!169;UBERON:0000925!1.92e-10!169;UBERON:0006595!1.92e-10!169;UBERON:0009569!4.01e-10!113;UBERON:0003103!8.11e-10!69;UBERON:0005177!1.90e-09!107;UBERON:0000477!2.37e-09!286;UBERON:0004921!2.99e-09!129;UBERON:0004185!2.99e-09!129;UBERON:0002417!3.01e-09!61;UBERON:0000916!3.01e-09!61;UBERON:0001007!3.13e-09!155;UBERON:0001555!3.13e-09!155;UBERON:0007026!3.13e-09!155;UBERON:0000475!4.45e-09!365;UBERON:0002530!5.70e-09!59;UBERON:0000483!9.49e-09!309;UBERON:0000025!9.58e-09!194;UBERON:0000949!1.04e-08!45;UBERON:0005172!1.97e-08!55;UBERON:0005173!1.97e-08!55;UBERON:0000119!2.57e-08!312;UBERON:0001048!3.32e-08!168;UBERON:0002368!4.94e-08!35;UBERON:0000464!8.11e-08!104;UBERON:0002553!1.56e-07!70;UBERON:0000077!1.95e-07!130;UBERON:0005911!4.15e-07!82;UBERON:0003929!6.17e-07!54;UBERON:0000062!7.37e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002368;1.01e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.66e-22,114;UBERON:0009569,1.31e-10,112;UBERON:0005177,3.37e-10,101;UBERON:0003103,8.36e-10,68;UBERON:0004111,1.02e-09,240;UBERON:0002417,1.88e-09,60;UBERON:0000916,1.88e-09,60;UBERON:0004119,3.79e-09,160;UBERON:0000925,3.79e-09,160;UBERON:0006595,3.79e-09,160;UBERON:0002530,5.08e-09,59;UBERON:0000949,8.70e-09,45;UBERON:0005172,1.28e-08,54;UBERON:0005173,1.28e-08,54;UBERON:0004921,2.70e-08,118;UBERON:0002368,3.09e-08,35;UBERON:0001007,7.19e-08,145;UBERON:0001555,7.19e-08,145;UBERON:0007026,7.19e-08,145;UBERON:0000025,1.18e-07,192;UBERON:0002100,2.82e-07,199;UBERON:0005911,3.50e-07,82;UBERON:0003929,5.89e-07,54;UBERON:0000483,7.16e-07,306 | |||
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| ||
|short_description=p2@ECHDC2 | |short_description=p2@ECHDC2 | ||
}} | }} |
Latest revision as of 13:22, 18 September 2015
Short description: | p2@ECHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ECHDC2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000371520, ENST00000541281, uc001cun.2, uc010onm.1_5end |
EntrezGene: | ECHDC2 |
HGNC: | 23408 |
UniProt: | F5H0R2B4DSN9Q8WY60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.66e-22 | 114 |
subdivision of trunk | 1.31e-10 | 112 |
trunk region element | 3.37e-10 | 101 |
compound organ | 8.36e-10 | 68 |
anatomical conduit | 1.02e-09 | 240 |
abdominal segment of trunk | 1.88e-09 | 60 |
abdomen | 1.88e-09 | 60 |
endoderm-derived structure | 3.79e-09 | 160 |
endoderm | 3.79e-09 | 160 |
presumptive endoderm | 3.79e-09 | 160 |
gland | 5.08e-09 | 59 |
endocrine system | 8.70e-09 | 45 |
abdomen element | 1.28e-08 | 54 |
abdominal segment element | 1.28e-08 | 54 |
subdivision of digestive tract | 2.70e-08 | 118 |
endocrine gland | 3.09e-08 | 35 |
digestive system | 7.19e-08 | 145 |
digestive tract | 7.19e-08 | 145 |
primitive gut | 7.19e-08 | 145 |
tube | 1.18e-07 | 192 |
trunk | 2.82e-07 | 199 |
endo-epithelium | 3.50e-07 | 82 |
gut epithelium | 5.89e-07 | 54 |
epithelium | 7.16e-07 | 306 |