FFCP PHASE1:Hg19::chr6:36930905..36930916,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221476 | |EntrezGene=221476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21245 | |HGNC=21245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-458bp_to_AL050088_5end | |association_with_transcript=-458bp_to_AL050088_5end | ||
|cluster_id=chr6:36930905..36930916,+ | |||
|coexpression_cluster_id=C4599 | |coexpression_cluster_id=C4599 | ||
|description=CAGE_peak_10_at_PI16_5end | |description=CAGE_peak_10_at_PI16_5end | ||
|id=chr6:36930905..36930916,+ | |id=chr6:36930905..36930916,+ | ||
|ontology_enrichment_celltype=CL:0002579;5.44e-23;3!CL:0002334;3.93e-13;12!CL:0000214;5.80e-07;3!CL:0002580;6.14e-07;3 | |ontology_enrichment_celltype=CL:0002334!4.40e-15!12;CL:0002579!7.17e-13!3;CL:0002580!2.58e-12!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002579;5.44e-23;3!CL:0002334;3.93e-13;12!CL:0000214;5.80e-07;3!CL:0002580;6.14e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,4.12e-23,3;CL:0002334,3.54e-13,12;CL:0000214,5.80e-07,3;CL:0002580,6.14e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.83e-18;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002079;4.83e-18;1!UBERON:0004457;2.61e-17;9!UBERON:0000042;2.61e-17;9!UBERON:0003688;5.23e-12;6!UBERON:0002358;5.23e-12;6!UBERON:0003684;5.23e-12;6!UBERON:0001178;5.23e-12;6!UBERON:0002081;1.07e-09;2!UBERON:0003127;1.57e-09;2!UBERON:0001155;3.07e-08;9!UBERON:0006915;5.80e-07;3!UBERON:0007616;5.80e-07;3!UBERON:0002217;5.80e-07;3!UBERON:0002018;5.80e-07;3!UBERON:0000059;6.74e-07;11!UBERON:0004151;7.08e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-11!115;UBERON:0004457!4.03e-08!12;UBERON:0000042!4.03e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;4.83e-18;1!UBERON:0004457;2.61e-17;9!UBERON:0000042;2.61e-17;9!UBERON:0003688;5.23e-12;6!UBERON:0002358;5.23e-12;6!UBERON:0003684;5.23e-12;6!UBERON:0001178;5.23e-12;6!UBERON:0002081;1.07e-09;2!UBERON:0003127;1.57e-09;2!UBERON:0001155;3.07e-08;9!UBERON:0006915;5.80e-07;3!UBERON:0007616;5.80e-07;3!UBERON:0002217;5.80e-07;3!UBERON:0002018;5.80e-07;3!UBERON:0000059;6.74e-07;11!UBERON:0004151;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,5.26e-18,1;UBERON:0004457,3.40e-13,12;UBERON:0000042,3.40e-13,12;UBERON:0003688,4.55e-12,6;UBERON:0002358,4.55e-12,6;UBERON:0003684,4.55e-12,6;UBERON:0001178,4.55e-12,6;UBERON:0002081,1.12e-09,2;UBERON:0010227,1.12e-09,2;UBERON:0003127,1.57e-09,2;UBERON:0001155,2.96e-08,9;UBERON:0006915,5.80e-07,3;UBERON:0007616,5.80e-07,3;UBERON:0002217,5.80e-07,3;UBERON:0002018,5.80e-07,3;UBERON:0000059,6.54e-07,11;UBERON:0004151,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,1.43418310374407,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70647957983187,0.306923946576125,0.280660094433074,1.53766979106841,2.55853624533352,0.482561763430822,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,7.24448764511784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,3.84167259326905,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,1.22574160876953,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,1.33064142618405,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,1.43418310374407,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70647957983187,0.306923946576125,0.280660094433074,1.53766979106841,2.55853624533352,0.482561763430822,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,7.24448764511784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,3.84167259326905,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,1.22574160876953,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,1.33064142618405,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p10@PI16 | |short_description=p10@PI16 | ||
}} | }} |
Latest revision as of 13:58, 18 September 2015
Short description: | p10@PI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PI16_5end |
Coexpression cluster: | C4599_Preadipocyte_Synoviocyte_tenocyte_eye_retina_leiomyoblastoma_Adipocyte |
Association with transcript: | -458bp_to_AL050088_5end |
EntrezGene: | PI16 |
HGNC: | 21245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 4.12e-23 | 3 |
preadipocyte | 3.54e-13 | 12 |
synovial cell | 5.80e-07 | 3 |
preadipocyte of the breast | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 5.26e-18 | 1 |
cavity lining | 3.40e-13 | 12 |
serous membrane | 3.40e-13 | 12 |
omentum | 4.55e-12 | 6 |
peritoneum | 4.55e-12 | 6 |
abdominal cavity | 4.55e-12 | 6 |
visceral peritoneum | 4.55e-12 | 6 |
cardiac atrium | 1.12e-09 | 2 |
future cardiac atrium | 1.12e-09 | 2 |
open tracheal system trachea | 1.57e-09 | 2 |
colon | 2.96e-08 | 9 |
stratified squamous epithelium | 5.80e-07 | 3 |
layer of synovial tissue | 5.80e-07 | 3 |
synovial joint | 5.80e-07 | 3 |
synovial membrane of synovial joint | 5.80e-07 | 3 |
large intestine | 6.54e-07 | 11 |
cardiac chamber | 7.28e-07 | 3 |