FFCP PHASE1:Hg19::chr19:45251805..45251840,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45251805..45251840,+
|short_description=p4@BCL3
|description=CAGE_peak_4_at_BCL3_5end
|association_with_transcript=1bp_to_ENST00000164227_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=602 | |EntrezGene=602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |HGNC=998 | ||
|TSSclassifier=strong | |||
|UniProt=P20749 | |UniProt=P20749 | ||
|association_with_transcript=1bp_to_ENST00000164227_5end | |||
|cluster_id=chr19:45251805..45251840,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_BCL3_5end | |||
|id=chr19:45251805..45251840,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.73e-13!76;CL:0002057!1.82e-12!42;CL:0000860!3.09e-11!45;CL:0000557!3.14e-10!71;CL:0002009!4.06e-09!65;CL:0000048!4.94e-09!430;CL:0002194!1.16e-08!63;CL:0000576!1.16e-08!63;CL:0000040!1.16e-08!63;CL:0000559!1.16e-08!63;CL:0000723!1.17e-08!436;CL:0002320!1.76e-08!365;CL:0000738!3.30e-08!140;CL:0000839!3.56e-08!70;CL:0000034!6.93e-08!444;CL:0000134!2.24e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-12;33!CL:0002057;1.05e-12;33!CL:0000473;4.08e-11;39!CL:0000234;4.08e-11;39!CL:0000576;5.11e-08;48!CL:0000766;2.36e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.08e-13,72;CL:0000473,3.06e-13,48;CL:0000234,3.06e-13,48;CL:0000860,1.79e-12,42;CL:0002057,1.79e-12,42;CL:0000557,6.96e-11,67;CL:0000048,6.61e-10,427;CL:0002009,9.40e-10,61;CL:0000723,1.27e-09,433;CL:0002194,2.81e-09,59;CL:0000576,2.81e-09,59;CL:0000040,2.81e-09,59;CL:0000559,2.81e-09,59;CL:0002320,6.40e-09,361;CL:0000839,6.74e-09,66;CL:0000034,1.12e-08,441;CL:0000738,1.67e-08,136;CL:0000134,8.98e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.93e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.48e-13!167;UBERON:0003081!1.58e-11!216;UBERON:0002390!2.86e-11!102;UBERON:0003061!2.86e-11!102;UBERON:0002193!2.12e-10!112;UBERON:0000926!2.72e-10!448;UBERON:0004120!2.72e-10!448;UBERON:0006603!2.72e-10!448;UBERON:0002371!6.52e-10!80;UBERON:0002405!1.52e-09!115;UBERON:0002384!4.59e-09!375;UBERON:0001474!9.56e-09!86;UBERON:0004765!9.91e-09!101;UBERON:0001434!9.91e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.12e-15,167;UBERON:0000926,3.08e-13,315;UBERON:0004120,3.08e-13,315;UBERON:0006603,3.08e-13,315;UBERON:0002390,1.18e-11,98;UBERON:0003061,1.18e-11,98;UBERON:0003081,8.65e-11,203;UBERON:0002193,1.18e-10,108;UBERON:0002371,1.53e-10,76;UBERON:0004765,4.12e-10,90;UBERON:0001434,4.31e-10,100;UBERON:0002384,1.49e-09,371;UBERON:0001474,2.42e-09,82;UBERON:0002405,8.53e-09,93 | |||
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| ||
|short_description=p4@BCL3 | |||
}} | }} |
Latest revision as of 14:01, 18 September 2015
Short description: | p4@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCL3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 1bp_to_ENST00000164227_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | P20749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.08e-13 | 72 |
defensive cell | 3.06e-13 | 48 |
phagocyte | 3.06e-13 | 48 |
classical monocyte | 1.79e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-12 | 42 |
granulocyte monocyte progenitor cell | 6.96e-11 | 67 |
multi fate stem cell | 6.61e-10 | 427 |
macrophage dendritic cell progenitor | 9.40e-10 | 61 |
somatic stem cell | 1.27e-09 | 433 |
monopoietic cell | 2.81e-09 | 59 |
monocyte | 2.81e-09 | 59 |
monoblast | 2.81e-09 | 59 |
promonocyte | 2.81e-09 | 59 |
connective tissue cell | 6.40e-09 | 361 |
myeloid lineage restricted progenitor cell | 6.74e-09 | 66 |
stem cell | 1.12e-08 | 441 |
leukocyte | 1.67e-08 | 136 |
mesenchymal cell | 8.98e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.12e-15 | 167 |
mesoderm | 3.08e-13 | 315 |
mesoderm-derived structure | 3.08e-13 | 315 |
presumptive mesoderm | 3.08e-13 | 315 |
hematopoietic system | 1.18e-11 | 98 |
blood island | 1.18e-11 | 98 |
lateral plate mesoderm | 8.65e-11 | 203 |
hemolymphoid system | 1.18e-10 | 108 |
bone marrow | 1.53e-10 | 76 |
skeletal element | 4.12e-10 | 90 |
skeletal system | 4.31e-10 | 100 |
connective tissue | 1.49e-09 | 371 |
bone element | 2.42e-09 | 82 |
immune system | 8.53e-09 | 93 |