FFCP PHASE2:Hg19::chr1:170633225..170633230,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5396 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9142 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9142 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P54821 | ||
|association_with_transcript=-82bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |association_with_transcript=-82bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | ||
|cluster_id=chr1:170633225..170633230,+ | |cluster_id=chr1:170633225..170633230,+ | ||
Latest revision as of 14:21, 18 September 2015
| Short description: | p25@PRRX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_25_at_PRRX1_5end |
| Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
| Association with transcript: | -82bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
| EntrezGene: | PRRX1 |
| HGNC: | 9142 |
| UniProt: | P54821 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p25@PRRX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 1.08e-12 | 76 |
| mesenchymal stem cell of adipose | 3.33e-12 | 8 |
| cell of skeletal muscle | 8.52e-10 | 9 |
| visceral preadipocyte | 2.68e-09 | 3 |
| skeletal muscle satellite cell | 3.09e-08 | 3 |
| fibroblast of dermis | 1.29e-07 | 6 |
| preadipocyte | 1.35e-07 | 12 |
| receptor cell | 1.89e-07 | 6 |
| sensory epithelial cell | 1.89e-07 | 6 |
| olfactory epithelial cell | 1.89e-07 | 6 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| adipose tissue | 3.33e-11 | 14 |
| somite | 4.44e-11 | 71 |
| presomitic mesoderm | 4.44e-11 | 71 |
| presumptive segmental plate | 4.44e-11 | 71 |
| dermomyotome | 4.44e-11 | 71 |
| trunk paraxial mesoderm | 4.44e-11 | 71 |
| paraxial mesoderm | 7.49e-11 | 72 |
| presumptive paraxial mesoderm | 7.49e-11 | 72 |
| dense mesenchyme tissue | 1.24e-10 | 73 |
| epithelial vesicle | 1.29e-09 | 78 |
Showing 1 to 10 of 22 entries
