FFCP PHASE1:Hg19::chr3:4856489..4856509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3708 | |EntrezGene=3708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6180 | |HGNC=6180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_ENST00000478515_5end | |association_with_transcript=160bp_to_ENST00000478515_5end | ||
|cluster_id=chr3:4856489..4856509,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_9_at_ITPR1_5end | |description=CAGE_peak_9_at_ITPR1_5end | ||
|id=chr3:4856489..4856509,+ | |id=chr3:4856489..4856509,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.55e-20!42;CL:0000860!1.26e-18!45;CL:0000839!8.00e-14!70;CL:0000557!1.65e-13!71;CL:0002194!7.71e-13!63;CL:0000576!7.71e-13!63;CL:0000040!7.71e-13!63;CL:0000559!7.71e-13!63;CL:0002009!3.28e-12!65;CL:0000766!4.57e-12!76;CL:0000763!5.70e-10!112;CL:0000049!5.70e-10!112 | |ontology_enrichment_celltype=CL:0002057!1.55e-20!42;CL:0000860!1.26e-18!45;CL:0000839!8.00e-14!70;CL:0000557!1.65e-13!71;CL:0002194!7.71e-13!63;CL:0000576!7.71e-13!63;CL:0000040!7.71e-13!63;CL:0000559!7.71e-13!63;CL:0002009!3.28e-12!65;CL:0000766!4.57e-12!76;CL:0000763!5.70e-10!112;CL:0000049!5.70e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-78;33!CL:0002057;1.99e-78;33!CL:0000473;1.29e-53;39!CL:0000234;1.29e-53;39!CL:0000576;9.05e-38;48!CL:0000766;2.95e-18;69!CL:0000763;3.32e-11;100!CL:0002087;9.95e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-67,42;CL:0002057,1.11e-67,42;CL:0000473,8.76e-59,48;CL:0000234,8.76e-59,48;CL:0002194,2.54e-46,59;CL:0000576,2.54e-46,59;CL:0000040,2.54e-46,59;CL:0000559,2.54e-46,59;CL:0002009,1.03e-44,61;CL:0000839,4.13e-41,66;CL:0000557,1.88e-40,67;CL:0000766,1.95e-37,72;CL:0000763,2.51e-29,108;CL:0000049,2.51e-29,108;CL:0002087,3.27e-22,115;CL:0002031,3.84e-21,120;CL:0002032,1.88e-18,161;CL:0000837,1.88e-18,161;CL:0000738,3.06e-18,136;CL:0000037,1.59e-17,168;CL:0000988,1.94e-16,177;CL:0000134,6.08e-08,354;CL:0002320,1.05e-07,361;CL:0000219,7.28e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.25e-50;42!CL:0000049;1.08e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.52e-24!115;UBERON:0002371!4.74e-11!80;UBERON:0001474!1.02e-09!86;UBERON:0001049!1.11e-09!57;UBERON:0005068!1.11e-09!57;UBERON:0006241!1.11e-09!57;UBERON:0007135!1.11e-09!57;UBERON:0005743!2.13e-08!86;UBERON:0002405!2.16e-08!115;UBERON:0001017!2.79e-08!82;UBERON:0002193!3.71e-08!112;UBERON:0003075!7.11e-08!86;UBERON:0007284!7.11e-08!86;UBERON:0002390!1.40e-07!102;UBERON:0003061!1.40e-07!102;UBERON:0000073!1.53e-07!94;UBERON:0001016!1.53e-07!94;UBERON:0000955!1.55e-07!69;UBERON:0006238!1.55e-07!69;UBERON:0002616!2.61e-07!59;UBERON:0002346!3.22e-07!90;UBERON:0004765!3.82e-07!101;UBERON:0001434!3.82e-07!101;UBERON:0003076!9.85e-07!15;UBERON:0003057!9.85e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-35,76;UBERON:0001474,1.71e-32,82;UBERON:0004765,2.56e-29,90;UBERON:0002405,2.88e-28,93;UBERON:0002390,1.18e-26,98;UBERON:0003061,1.18e-26,98;UBERON:0001434,4.70e-26,100;UBERON:0002193,7.12e-24,108;UBERON:0002204,7.48e-16,167;UBERON:0003081,5.06e-11,203;UBERON:0002384,2.67e-08,371 | |||
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| ||
|short_description=p9@ITPR1 | |short_description=p9@ITPR1 | ||
}} | }} |
Latest revision as of 14:31, 18 September 2015
Short description: | p9@ITPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ITPR1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 160bp_to_ENST00000478515_5end |
EntrezGene: | ITPR1 |
HGNC: | 6180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.11e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-67 | 42 |
defensive cell | 8.76e-59 | 48 |
phagocyte | 8.76e-59 | 48 |
monopoietic cell | 2.54e-46 | 59 |
monocyte | 2.54e-46 | 59 |
monoblast | 2.54e-46 | 59 |
promonocyte | 2.54e-46 | 59 |
macrophage dendritic cell progenitor | 1.03e-44 | 61 |
myeloid lineage restricted progenitor cell | 4.13e-41 | 66 |
granulocyte monocyte progenitor cell | 1.88e-40 | 67 |
myeloid leukocyte | 1.95e-37 | 72 |
myeloid cell | 2.51e-29 | 108 |
common myeloid progenitor | 2.51e-29 | 108 |
nongranular leukocyte | 3.27e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 3.84e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.88e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-18 | 161 |
leukocyte | 3.06e-18 | 136 |
hematopoietic stem cell | 1.59e-17 | 168 |
hematopoietic cell | 1.94e-16 | 177 |
mesenchymal cell | 6.08e-08 | 354 |
connective tissue cell | 1.05e-07 | 361 |
motile cell | 7.28e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-35 | 76 |
bone element | 1.71e-32 | 82 |
skeletal element | 2.56e-29 | 90 |
immune system | 2.88e-28 | 93 |
hematopoietic system | 1.18e-26 | 98 |
blood island | 1.18e-26 | 98 |
skeletal system | 4.70e-26 | 100 |
hemolymphoid system | 7.12e-24 | 108 |
musculoskeletal system | 7.48e-16 | 167 |
lateral plate mesoderm | 5.06e-11 | 203 |
connective tissue | 2.67e-08 | 371 |