FFCP PHASE1:Hg19::chr14:103602720..103602729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7127 | |EntrezGene=7127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11895 | |HGNC=11895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000561217_5end | |association_with_transcript=-10bp_to_ENST00000561217_5end | ||
|cluster_id=chr14:103602720..103602729,+ | |||
|coexpression_cluster_id=C2278 | |coexpression_cluster_id=C2278 | ||
|description=CAGE_peak_27_at_TNFAIP2_5end | |description=CAGE_peak_27_at_TNFAIP2_5end | ||
|id=chr14:103602720..103602729,+ | |id=chr14:103602720..103602729,+ | ||
|ontology_enrichment_celltype=CL:0000860;2.06e-43;33!CL:0002057;2.06e-43;33!CL:0000576;8.88e-32;48!CL:0000473;8.94e-31;39!CL:0000234;8.94e-31;39!CL:0000766;5.11e-15;69!CL:0002087;4.39e-10;104!CL:0000763;5.21e-07;100!CL:0002393;8.39e-07;6!CL:0002397;8.39e-07;6 | |ontology_enrichment_celltype=CL:0002057!2.99e-39!42;CL:0000860!8.15e-36!45;CL:0002009!4.31e-34!65;CL:0002194!9.13e-34!63;CL:0000576!9.13e-34!63;CL:0000040!9.13e-34!63;CL:0000559!9.13e-34!63;CL:0000557!3.89e-33!71;CL:0000839!4.23e-32!70;CL:0000766!6.41e-30!76;CL:0000763!4.73e-20!112;CL:0000049!4.73e-20!112;CL:0002031!9.26e-17!124;CL:0000738!1.47e-16!140;CL:0002087!2.85e-16!119;CL:0002032!6.85e-12!165;CL:0000837!6.85e-12!165;CL:0000037!1.74e-11!172;CL:0000566!1.74e-11!172;CL:0000988!4.36e-10!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.06e-43;33!CL:0002057;2.06e-43;33!CL:0000576;8.88e-32;48!CL:0000473;8.94e-31;39!CL:0000234;8.94e-31;39!CL:0000766;5.11e-15;69!CL:0002087;4.39e-10;104!CL:0000763;5.21e-07;100!CL:0002393;8.39e-07;6!CL:0002397;8.39e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.34e-50,42;CL:0002057,3.34e-50,42;CL:0000473,1.31e-43,48;CL:0000234,1.31e-43,48;CL:0002194,6.19e-39,59;CL:0000576,6.19e-39,59;CL:0000040,6.19e-39,59;CL:0000559,6.19e-39,59;CL:0002009,1.37e-37,61;CL:0000839,1.40e-34,66;CL:0000557,4.94e-34,67;CL:0000766,1.63e-31,72;CL:0000763,3.53e-20,108;CL:0000049,3.53e-20,108;CL:0002087,8.66e-19,115;CL:0002031,6.79e-18,120;CL:0000738,1.81e-15,136;CL:0002032,1.24e-12,161;CL:0000837,1.24e-12,161;CL:0000037,5.46e-12,168;CL:0000988,3.10e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-33;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.99e-29!80;UBERON:0001474!2.30e-26!86;UBERON:0004765!4.83e-25!101;UBERON:0001434!4.83e-25!101;UBERON:0002390!1.94e-23!102;UBERON:0003061!1.94e-23!102;UBERON:0002193!5.69e-21!112;UBERON:0002405!5.74e-21!115;UBERON:0002204!3.53e-15!167;UBERON:0003081!5.75e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.86e-30,76;UBERON:0001474,2.21e-27,82;UBERON:0004765,9.94e-25,90;UBERON:0002405,7.52e-24,93;UBERON:0002390,1.67e-22,98;UBERON:0003061,1.67e-22,98;UBERON:0001434,5.31e-22,100;UBERON:0002193,3.53e-20,108;UBERON:0002204,9.89e-14,167;UBERON:0003081,1.99e-09,203 | |||
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| ||
|short_description=p27@TNFAIP2 | |short_description=p27@TNFAIP2 | ||
}} | }} |
Latest revision as of 14:56, 18 September 2015
Short description: | p27@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_TNFAIP2_5end |
Coexpression cluster: | C2278_squamous_CD14_embryonic_mesothelioma_malignant_Monocytederived_glassy |
Association with transcript: | -10bp_to_ENST00000561217_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.34e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.34e-50 | 42 |
defensive cell | 1.31e-43 | 48 |
phagocyte | 1.31e-43 | 48 |
monopoietic cell | 6.19e-39 | 59 |
monocyte | 6.19e-39 | 59 |
monoblast | 6.19e-39 | 59 |
promonocyte | 6.19e-39 | 59 |
macrophage dendritic cell progenitor | 1.37e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.40e-34 | 66 |
granulocyte monocyte progenitor cell | 4.94e-34 | 67 |
myeloid leukocyte | 1.63e-31 | 72 |
myeloid cell | 3.53e-20 | 108 |
common myeloid progenitor | 3.53e-20 | 108 |
nongranular leukocyte | 8.66e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 6.79e-18 | 120 |
leukocyte | 1.81e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.24e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-12 | 161 |
hematopoietic stem cell | 5.46e-12 | 168 |
hematopoietic cell | 3.10e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.86e-30 | 76 |
bone element | 2.21e-27 | 82 |
skeletal element | 9.94e-25 | 90 |
immune system | 7.52e-24 | 93 |
hematopoietic system | 1.67e-22 | 98 |
blood island | 1.67e-22 | 98 |
skeletal system | 5.31e-22 | 100 |
hemolymphoid system | 3.53e-20 | 108 |
musculoskeletal system | 9.89e-14 | 167 |
lateral plate mesoderm | 1.99e-09 | 203 |