FFCP PHASE1:Hg19::chr14:103602772..103602786,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:103602772..103602786,+
|short_description=p15@TNFAIP2
|description=CAGE_peak_15_at_TNFAIP2_5end
|association_with_transcript=32bp_to_ENST00000561217_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7127 | |EntrezGene=7127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11895 | |HGNC=11895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000561217_5end | |||
|cluster_id=chr14:103602772..103602786,+ | |||
|coexpression_cluster_id=C2278 | |||
|description=CAGE_peak_15_at_TNFAIP2_5end | |||
|id=chr14:103602772..103602786,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.91e-39!42;CL:0000860!6.65e-36!45;CL:0002009!9.93e-35!65;CL:0002194!2.32e-34!63;CL:0000576!2.32e-34!63;CL:0000040!2.32e-34!63;CL:0000559!2.32e-34!63;CL:0000766!1.63e-30!76;CL:0000557!1.75e-30!71;CL:0000839!2.07e-29!70;CL:0000763!6.71e-23!112;CL:0000049!6.71e-23!112;CL:0000738!6.14e-18!140;CL:0002087!8.06e-18!119;CL:0002031!5.31e-15!124;CL:0000037!3.66e-14!172;CL:0000566!3.66e-14!172;CL:0002032!1.84e-13!165;CL:0000837!1.84e-13!165;CL:0000988!4.95e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-58;33!CL:0002057;2.10e-58;33!CL:0000473;2.60e-46;39!CL:0000234;2.60e-46;39!CL:0000576;7.01e-44;48!CL:0000766;4.15e-25;69!CL:0000763;1.37e-11;100!CL:0002087;3.35e-11;104!CL:0002393;1.94e-08;6!CL:0002397;1.94e-08;6!CL:0002619;1.56e-07;3!CL:0000738;1.65e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.33e-67,42;CL:0002057,8.33e-67,42;CL:0000473,9.30e-63,48;CL:0000234,9.30e-63,48;CL:0002194,1.71e-57,59;CL:0000576,1.71e-57,59;CL:0000040,1.71e-57,59;CL:0000559,1.71e-57,59;CL:0002009,1.89e-55,61;CL:0000839,7.05e-51,66;CL:0000557,4.81e-50,67;CL:0000766,7.00e-50,72;CL:0000763,4.89e-34,108;CL:0000049,4.89e-34,108;CL:0002087,6.49e-27,115;CL:0002031,1.47e-25,120;CL:0000738,8.97e-24,136;CL:0002032,6.99e-21,161;CL:0000837,6.99e-21,161;CL:0000037,9.24e-20,168;CL:0000988,1.89e-18,177;CL:0002619,2.11e-07,3;CL:0000134,6.79e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-46;42!CL:0000049;6.22e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.14e-28!80;UBERON:0001474!1.96e-26!86;UBERON:0002390!2.19e-26!102;UBERON:0003061!2.19e-26!102;UBERON:0002193!1.24e-24!112;UBERON:0002405!3.09e-20!115;UBERON:0004765!3.61e-20!101;UBERON:0001434!3.61e-20!101;UBERON:0002204!6.86e-08!167;UBERON:0003081!1.20e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.12e-47,76;UBERON:0001474,2.84e-43,82;UBERON:0004765,6.09e-39,90;UBERON:0002405,1.66e-37,93;UBERON:0002390,2.61e-35,98;UBERON:0003061,2.61e-35,98;UBERON:0001434,1.72e-34,100;UBERON:0002193,1.61e-31,108;UBERON:0002204,2.48e-18,167;UBERON:0003081,4.93e-14,203;UBERON:0000926,1.57e-08,315;UBERON:0004120,1.57e-08,315;UBERON:0006603,1.57e-08,315;UBERON:0002384,5.23e-07,371 | |||
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| ||
|short_description=p15@TNFAIP2 | |||
}} | }} |
Latest revision as of 14:57, 18 September 2015
Short description: | p15@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TNFAIP2_5end |
Coexpression cluster: | C2278_squamous_CD14_embryonic_mesothelioma_malignant_Monocytederived_glassy |
Association with transcript: | 32bp_to_ENST00000561217_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.33e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.33e-67 | 42 |
defensive cell | 9.30e-63 | 48 |
phagocyte | 9.30e-63 | 48 |
monopoietic cell | 1.71e-57 | 59 |
monocyte | 1.71e-57 | 59 |
monoblast | 1.71e-57 | 59 |
promonocyte | 1.71e-57 | 59 |
macrophage dendritic cell progenitor | 1.89e-55 | 61 |
myeloid lineage restricted progenitor cell | 7.05e-51 | 66 |
granulocyte monocyte progenitor cell | 4.81e-50 | 67 |
myeloid leukocyte | 7.00e-50 | 72 |
myeloid cell | 4.89e-34 | 108 |
common myeloid progenitor | 4.89e-34 | 108 |
nongranular leukocyte | 6.49e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 1.47e-25 | 120 |
leukocyte | 8.97e-24 | 136 |
hematopoietic oligopotent progenitor cell | 6.99e-21 | 161 |
hematopoietic multipotent progenitor cell | 6.99e-21 | 161 |
hematopoietic stem cell | 9.24e-20 | 168 |
hematopoietic cell | 1.89e-18 | 177 |
adult endothelial progenitor cell | 2.11e-07 | 3 |
mesenchymal cell | 6.79e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.12e-47 | 76 |
bone element | 2.84e-43 | 82 |
skeletal element | 6.09e-39 | 90 |
immune system | 1.66e-37 | 93 |
hematopoietic system | 2.61e-35 | 98 |
blood island | 2.61e-35 | 98 |
skeletal system | 1.72e-34 | 100 |
hemolymphoid system | 1.61e-31 | 108 |
musculoskeletal system | 2.48e-18 | 167 |
lateral plate mesoderm | 4.93e-14 | 203 |
mesoderm | 1.57e-08 | 315 |
mesoderm-derived structure | 1.57e-08 | 315 |
presumptive mesoderm | 1.57e-08 | 315 |
connective tissue | 5.23e-07 | 371 |