FFCP PHASE1:Hg19::chr6:3752222..3752255,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21361 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TGL8 | |||
|association_with_transcript=0bp_to_NM_183373,uc003mvt.2_5end | |||
|cluster_id=chr6:3752222..3752255,- | |||
|description=CAGE_peak_2_at_PXDC1_5end | |||
|id=chr6:3752222..3752255,- | |||
|ontology_enrichment_celltype=CL:0000220!6.33e-19!246;CL:0002321!1.37e-18!248;CL:0000222!2.14e-18!119;CL:0000213!4.33e-17!57;CL:0000215!4.33e-17!57;CL:0002078!6.18e-16!44;CL:0000066!7.37e-16!254;CL:0000115!1.54e-15!35;CL:0002139!4.71e-12!24;CL:0000055!1.66e-09!180;CL:0000071!2.43e-09!18;CL:0002546!2.43e-09!18;CL:0000076!8.52e-09!62 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.75e-14;36!CL:0002139;1.73e-12;24!CL:0002078;2.77e-11;45!CL:0000213;3.67e-10;58!CL:0000215;3.67e-10;58!CL:0000071;1.52e-09;18!CL:1000497;4.63e-07;17!CL:0002518;4.63e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.91e-18,58;CL:0000215,1.91e-18,58;CL:0000222,3.66e-18,121;CL:0002321,1.63e-17,250;CL:0002078,5.17e-17,45;CL:0000115,1.43e-16,36;CL:0000066,1.07e-15,253;CL:0002139,1.11e-12,24;CL:0000071,8.32e-10,18;CL:0002546,8.32e-10,18;CL:0000076,3.84e-09,63;CL:1000497,5.87e-07,17;CL:0002518,5.87e-07,17;CL:1000449,7.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;1.52e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.78e-21!118;UBERON:0000477!4.14e-19!286;UBERON:0000119!5.04e-18!312;UBERON:0002049!9.47e-18!79;UBERON:0007798!9.47e-18!79;UBERON:0000483!4.98e-17!309;UBERON:0004111!1.03e-16!241;UBERON:0000055!1.29e-16!69;UBERON:0004872!1.51e-16!84;UBERON:0001981!4.89e-14!60;UBERON:0007500!4.89e-14!60;UBERON:0004537!4.89e-14!60;UBERON:0006965!4.89e-14!60;UBERON:0000025!8.91e-14!194;UBERON:0000468!2.01e-13!659;UBERON:0000467!4.06e-13!625;UBERON:0000480!8.12e-13!626;UBERON:0000481!1.76e-12!347;UBERON:0002100!2.40e-12!216;UBERON:0005256!4.95e-12!143;UBERON:0000490!6.13e-12!138;UBERON:0003104!1.23e-11!238;UBERON:0009142!1.23e-11!238;UBERON:0001009!7.13e-11!113;UBERON:0000475!1.17e-10!365;UBERON:0004535!1.68e-10!110;UBERON:0001637!2.20e-09!42;UBERON:0003509!2.20e-09!42;UBERON:0004572!2.20e-09!42;UBERON:0001986!2.43e-09!18;UBERON:0004638!2.43e-09!18;UBERON:0004852!2.43e-09!18;UBERON:0000923!7.63e-09!604;UBERON:0005291!7.63e-09!604;UBERON:0006598!7.63e-09!604;UBERON:0002532!7.63e-09!604;UBERON:0002050!7.73e-09!605;UBERON:0005423!7.73e-09!605;UBERON:0006914!2.13e-08!25;UBERON:0000487!2.49e-08!22;UBERON:0000922!2.73e-08!612;UBERON:0002417!4.49e-08!61;UBERON:0000916!4.49e-08!61;UBERON:0000064!6.31e-08!219;UBERON:0000466!9.27e-08!126;UBERON:0005177!1.23e-07!107;UBERON:0009569!1.83e-07!113;UBERON:0005172!2.34e-07!55;UBERON:0005173!2.34e-07!55;UBERON:0004119!2.51e-07!169;UBERON:0000925!2.51e-07!169;UBERON:0006595!2.51e-07!169;UBERON:0000926!5.27e-07!448;UBERON:0004120!5.27e-07!448;UBERON:0006603!5.27e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.52e-09;18!UBERON:0001986;1.52e-09;18!UBERON:0004852;1.52e-09;18!UBERON:0000055;5.55e-09;65!UBERON:0007500;8.65e-09;56!UBERON:0001981;8.65e-09;56!UBERON:0004537;8.65e-09;56!UBERON:0006914;1.39e-08;25!UBERON:0000487;2.16e-08;22!UBERON:0003914;4.27e-08;74!UBERON:0002049;3.16e-07;75!UBERON:0007798;3.16e-07;75!UBERON:0000353;4.90e-07;15!UBERON:0001637;6.54e-07;42!UBERON:0003509;6.54e-07;42!UBERON:0004572;6.54e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.10e-22,117;UBERON:0002049,1.75e-17,78;UBERON:0007798,1.75e-17,78;UBERON:0000055,7.32e-17,68;UBERON:0004872,2.71e-16,83;UBERON:0000119,1.66e-15,309;UBERON:0000483,1.48e-14,306;UBERON:0004111,1.53e-14,240;UBERON:0007500,5.57e-14,59;UBERON:0001981,5.57e-14,59;UBERON:0004537,5.57e-14,59;UBERON:0006965,5.57e-14,59;UBERON:0000025,2.99e-12,192;UBERON:0000490,1.26e-11,148;UBERON:0002100,6.00e-11,199;UBERON:0001009,6.68e-11,112;UBERON:0004535,1.64e-10,109;UBERON:0003104,6.49e-10,160;UBERON:0009142,6.49e-10,160;UBERON:0001637,8.12e-10,42;UBERON:0003509,8.12e-10,42;UBERON:0004572,8.12e-10,42;UBERON:0004638,8.32e-10,18;UBERON:0001986,8.32e-10,18;UBERON:0004852,8.32e-10,18;UBERON:0005256,2.04e-09,122;UBERON:0006914,1.26e-08,25;UBERON:0002417,1.40e-08,60;UBERON:0000916,1.40e-08,60;UBERON:0000487,1.52e-08,22;UBERON:0005172,8.04e-08,54;UBERON:0005173,8.04e-08,54;UBERON:0009569,1.58e-07,112;UBERON:0000353,2.17e-07,15;UBERON:0005177,5.79e-07,101;UBERON:0004211,7.34e-07,15;UBERON:0009773,7.34e-07,15;UBERON:0001231,7.34e-07,15;UBERON:0001285,7.34e-07,15;UBERON:0007684,7.34e-07,15;UBERON:0004208,7.34e-07,15 | |||
|phase1_expression=1.63510541343501,0.856402095563933,2.39622486963151,1.0007329835313,2.68176656656373,0,0,0.631719873426831,0.783556884599516,2.21160542851358,7.6758128476967,2.18441372130172,2.63766978228454,1.73272894144065,2.31978163009541,2.6893005858071,1.20538905604795,0.730310090387373,3.41552959153355,3.69363174230364,5.71201935483908,5.64218498660558,1.43117993565528,1.50561867580173,3.26410862946487,0,0,0,0,0,0,4.59710612239464,1.204823675113,2.58827807116751,0,0,0,0.553995408531877,0,0,3.35873211359887,0.971680998056939,1.80302897343931,0.145398238779565,0,0.242584061187816,0.929716147622738,0.822335776043652,1.23882548358041,0,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.564727018627814,0,0,0.612167784741805,1.28371610830437,0.639337125799041,0.659702600373432,0.598390972864896,0.852449501065388,0.580418477257168,1.13477044938228,0,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,1.63841583378639,2.66852776159066,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,0,0.445641827540694,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.91793842765295,0.361439152384566,3.00802746381534,3.91085601194224,0,2.43317435151318,0.567208902984407,1.99556457716308,1.58102614247627,1.44076983047484,4.00724817121796,1.85392221392215,0.324547393654683,0.870648686496336,0.531831842075461,0,0.571994910780128,0.371457501329565,6.16163462836786,1.72046919021225,7.63709103536707,2.82653970962005,5.03399323451887,3.57653454522088,4.80688423034664,3.87625138753993,3.5576626268671,3.01248551488203,10.4735622448378,3.04108842287405,12.2031028774085,4.77962004449629,5.67099363517232,4.46498641420399,3.36794058939255,1.57656072676651,10.7321646226118,3.79706263827252,4.39684185432977,0,0,1.74437620857014,1.49091585508596,3.67228483827281,1.85372853138506,1.43418310374407,1.77334191099179,5.04609840128076,5.33744978648525,3.7000132262574,0.311211035399766,3.23305612967251,0.817309515567294,2.72443369760877,2.30470369792,4.92075006850973,1.5608003841516,1.1409436430889,0.448346041655403,2.70099346880659,3.0755859429945,2.66856532734272,1.22492502752936,1.22834317311768,2.06651562351531,1.18800285728205,1.97813543422845,2.73048408581408,6.46756327634615,2.69337782326506,1.25118519871964,0.831192346452549,2.19488810440419,1.5324389789951,2.40380894250555,3.40296549480063,1.25572744982203,2.77624605464138,1.05965950579781,1.20036438433761,1.33968288009971,1.54584324027377,2.23340227597908,1.0126579934476,2.63079913935236,1.51460264546469,1.47279837827679,1.45481451136931,1.06502877754984,2.01504196455281,2.88253006927829,2.89891279744945,1.36373060295417,0.860413786167011,0.731842236777572,1.06023814657188,0.813357600086629,1.34759371519982,0,0.72995471815166,1.56449532329816,1.28648187638577,1.38134921352481,1.39310378409594,1.44375896333917,3.31259040111563,2.02301628093722,2.89213235860178,2.53676137284506,2.39667388501647,1.18635309555548,1.48314438976181,1.37355025587742,2.30848294167834,8.85786545549578,5.60967095213783,4.9388881359768,5.88034845542168,2.53510069643662,4.91413608338813,2.95394953340702,0,3.32068784066407,1.54411029268673,2.41450627898976,3.37205259772859,2.6137532827024,1.66659201285353,6.84197441151682,1.03993478527958,0,0.231860809950154,2.11335649624479,5.34155856715973,4.62985512576611,4.18559134916116,0,0,1.72351904261178,0.702012795417713,1.33768046059855,0.93733833986777,2.01578553838631,0.850650583454319,3.40322386270824,3.19697332365358,1.91691339582606,0,0,2.69526550203004,4.17947864909188,3.53478813593864,1.90493682876507,3.05590740446622,3.51652341630141,3.4214489204541,3.29047976650635,0.600686115687835,1.42913216315289,4.59737445815979,6.10344096366592,2.56684000373325,0.387815147273333,7.15312891703765,3.381211010224,1.59562869950922,0,2.82928111688356,1.41849132023278,1.8649552531127,2.14466990487221,5.42621605391443,3.29296134712308,1.30294473717494,2.48774364119782,1.58390374586686,1.50719688529793,0,1.29964888536674,0,3.51579964002488,2.10833939483032,5.03212196532324,5.7430967917057,1.42636905040718,1.88215698667853,1.84928690295345,3.04403637507822,0,0.197030760201927,0,0,1.27047312111232,1.30139853857622,0,1.34013012267479,0.637938751653163,0.749007023947182,0,0,1.47229790062968,0.500170521059677,1.62759014219841,1.66376689224646,2.3195768543631,2.52323864054295,2.34282829985426,1.50473049863859,0,1.03473071292505,4.64957918974806,2.02806085395873,1.56390506042549,7.63624514104688,7.20601190002797,0,0,0,5.15316871458641,4.99306318531491,6.35019615992329,2.23297027036899,2.14846762603287,2.52594084989766,3.97231362692673,1.02341449813341,4.18220194973379,1.48418066444991,1.23367755042124,0.887808626565635,1.06765302817952,1.55776328755086,1.74315567689939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| |||
|short_description=p2@PXDC1 | |||
}} |
Latest revision as of 15:15, 18 September 2015
Short description: | p2@PXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_183373, uc003mvt.2_5end |
EntrezGene: | PXDC1 |
HGNC: | 21361 |
UniProt: | Q5TGL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.91e-18 | 58 |
barrier cell | 1.91e-18 | 58 |
mesodermal cell | 3.66e-18 | 121 |
embryonic cell | 1.63e-17 | 250 |
meso-epithelial cell | 5.17e-17 | 45 |
endothelial cell | 1.43e-16 | 36 |
epithelial cell | 1.07e-15 | 253 |
endothelial cell of vascular tree | 1.11e-12 | 24 |
blood vessel endothelial cell | 8.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.32e-10 | 18 |
squamous epithelial cell | 3.84e-09 | 63 |
kidney cell | 5.87e-07 | 17 |
kidney epithelial cell | 5.87e-07 | 17 |
epithelial cell of nephron | 7.34e-07 | 15 |