FFCP PHASE1:Hg19::chr12:49523320..49523345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10376 | |EntrezGene=10376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18809 | |HGNC=18809 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=137bp_to_S62639_5end | |association_with_transcript=137bp_to_S62639_5end | ||
|cluster_id=chr12:49523320..49523345,- | |||
|description=CAGE_peak_2_at_TUBA1B_5end | |description=CAGE_peak_2_at_TUBA1B_5end | ||
|id=chr12:49523320..49523345,- | |id=chr12:49523320..49523345,- | ||
|ontology_enrichment_celltype=CL:0000055!1.39e-12!180;CL:0000222!3.00e-11!119;CL:0002321!3.42e-10!248;CL:0000220!6.61e-10!246;CL:0000393!4.05e-08!60;CL:0000211!4.05e-08!60 | |ontology_enrichment_celltype=CL:0000055!1.39e-12!180;CL:0000222!3.00e-11!119;CL:0002321!3.42e-10!248;CL:0000220!6.61e-10!246;CL:0000393!4.05e-08!60;CL:0000211!4.05e-08!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.07e-11,121;CL:0002321,2.34e-10,250;CL:0000393,3.50e-08,61;CL:0000211,3.50e-08,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.53e-12!312;UBERON:0000483!8.62e-12!309;UBERON:0005256!2.08e-07!143;UBERON:0000490!2.20e-07!138;UBERON:0000064!2.38e-07!219;UBERON:0000477!5.38e-07!286;UBERON:0004290!6.25e-07!70;UBERON:0003914!6.71e-07!118;UBERON:0000025!9.14e-07!194 | |ontology_enrichment_uberon=UBERON:0000119!2.53e-12!312;UBERON:0000483!8.62e-12!309;UBERON:0005256!2.08e-07!143;UBERON:0000490!2.20e-07!138;UBERON:0000064!2.38e-07!219;UBERON:0000477!5.38e-07!286;UBERON:0004290!6.25e-07!70;UBERON:0003914!6.71e-07!118;UBERON:0000025!9.14e-07!194 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.72e-12,309;UBERON:0000483,9.31e-12,306;UBERON:0000490,4.99e-09,148;UBERON:0007503,8.64e-09,78;UBERON:0003077,3.12e-07,72;UBERON:0007285,3.12e-07,72;UBERON:0007524,4.17e-07,73;UBERON:0003914,4.78e-07,117;UBERON:0002329,6.02e-07,71;UBERON:0003059,6.02e-07,71;UBERON:0007282,6.02e-07,71;UBERON:0004290,6.02e-07,71;UBERON:0009618,6.02e-07,71;UBERON:0000025,8.80e-07,192 | |||
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| ||
|short_description=p2@TUBA1B | |short_description=p2@TUBA1B | ||
}} | }} |
Latest revision as of 15:40, 18 September 2015
Short description: | p2@TUBA1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBA1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 137bp_to_S62639_5end |
EntrezGene: | TUBA1B |
HGNC: | 18809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.07e-11 | 121 |
embryonic cell | 2.34e-10 | 250 |
electrically responsive cell | 3.50e-08 | 61 |
electrically active cell | 3.50e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.72e-12 | 309 |
epithelium | 9.31e-12 | 306 |
unilaminar epithelium | 4.99e-09 | 148 |
epithelial vesicle | 8.64e-09 | 78 |
paraxial mesoderm | 3.12e-07 | 72 |
presumptive paraxial mesoderm | 3.12e-07 | 72 |
dense mesenchyme tissue | 4.17e-07 | 73 |
epithelial tube | 4.78e-07 | 117 |
somite | 6.02e-07 | 71 |
presomitic mesoderm | 6.02e-07 | 71 |
presumptive segmental plate | 6.02e-07 | 71 |
dermomyotome | 6.02e-07 | 71 |
trunk paraxial mesoderm | 6.02e-07 | 71 |
tube | 8.80e-07 | 192 |