FFCP PHASE1:Hg19::chr2:85892828..85892855,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10801 | |||
|TSSclassifier=strong | |||
|UniProt=P07988 | |||
|association_with_transcript=40bp_to_M19097_5end | |||
|cluster_id=chr2:85892828..85892855,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_7_at_SFTPB_5end | |||
|id=chr2:85892828..85892855,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.39e-09;29!UBERON:0001041;2.76e-09;30!UBERON:0007123;6.58e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!1.53e-21!1;UBERON:0006518!1.53e-21!1;UBERON:0008949!1.53e-21!1;UBERON:0000101!1.53e-21!1;UBERON:0002167!1.53e-21!1;UBERON:0003127!4.52e-11!2;UBERON:0005178!8.96e-10!34;UBERON:0002224!8.96e-10!34;UBERON:0005181!1.67e-09!35;UBERON:0002048!6.84e-09!22;UBERON:0000117!6.84e-09!22;UBERON:0000171!6.84e-09!22;UBERON:0000170!6.84e-09!22;UBERON:0005597!6.84e-09!22;UBERON:0000118!6.84e-09!22;UBERON:0008947!8.86e-09!38;UBERON:0003258!8.86e-09!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.48e-30;1!UBERON:0006518;7.48e-30;1!UBERON:0008949;7.48e-30;1!UBERON:0000101;7.48e-30;1!UBERON:0002167;7.48e-30;1!UBERON:0002048;2.09e-12;22!UBERON:0000117;2.09e-12;22!UBERON:0000171;2.09e-12;22!UBERON:0000170;2.09e-12;22!UBERON:0005178;1.83e-07;34!UBERON:0002224;1.83e-07;34!UBERON:0002046;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.48e-30,1;UBERON:0006518,7.48e-30,1;UBERON:0008949,7.48e-30,1;UBERON:0000101,7.48e-30,1;UBERON:0002167,7.48e-30,1;UBERON:0002048,2.09e-12,22;UBERON:0000117,2.09e-12,22;UBERON:0000171,2.09e-12,22;UBERON:0000170,2.09e-12,22;UBERON:0005597,2.09e-12,22;UBERON:0000118,2.09e-12,22;UBERON:0005178,2.86e-08,34;UBERON:0002224,2.86e-08,34;UBERON:0005181,4.72e-08,35;UBERON:0005153,1.19e-07,37;UBERON:0008947,1.82e-07,38;UBERON:0003258,1.82e-07,38;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0362237703084,7.3886023396843,36.038797815206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33659032384146,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@SFTPB | |||
}} |
Latest revision as of 17:18, 18 September 2015
Short description: | p7@SFTPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SFTPB_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 40bp_to_M19097_5end |
EntrezGene: | SFTPB |
HGNC: | 10801 |
UniProt: | P07988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.48e-30 | 1 |
right lung lobe | 7.48e-30 | 1 |
lower lobe of lung | 7.48e-30 | 1 |
lobe of lung | 7.48e-30 | 1 |
right lung | 7.48e-30 | 1 |
lung | 2.09e-12 | 22 |
respiratory tube | 2.09e-12 | 22 |
respiration organ | 2.09e-12 | 22 |
pair of lungs | 2.09e-12 | 22 |
lung primordium | 2.09e-12 | 22 |
lung bud | 2.09e-12 | 22 |
thoracic cavity element | 2.86e-08 | 34 |
thoracic cavity | 2.86e-08 | 34 |
thoracic segment organ | 4.72e-08 | 35 |
epithelial bud | 1.19e-07 | 37 |
respiratory primordium | 1.82e-07 | 38 |
endoderm of foregut | 1.82e-07 | 38 |
thyroid gland | 6.39e-07 | 5 |
pharyngeal pouch | 6.39e-07 | 5 |
thyroid diverticulum | 6.39e-07 | 5 |
pharyngeal pouch 2 | 6.39e-07 | 5 |
thyroid primordium | 6.39e-07 | 5 |