FFCP PHASE1:Hg19::chr17:14204341..14204353,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9953 | |EntrezGene=9953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5198 | |HGNC=5198 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y662 | |UniProt=Q9Y662 | ||
|association_with_transcript=-46bp_to_ENST00000360954,ENST00000466596_5end | |association_with_transcript=-46bp_to_ENST00000360954,ENST00000466596_5end | ||
|cluster_id=chr17:14204341..14204353,+ | |||
|coexpression_cluster_id=C3605 | |coexpression_cluster_id=C3605 | ||
|description=CAGE_peak_3_at_HS3ST3B1_5end | |description=CAGE_peak_3_at_HS3ST3B1_5end | ||
|id=chr17:14204341..14204353,+ | |id=chr17:14204341..14204353,+ | ||
|ontology_enrichment_celltype=CL:0002320!2.61e-09!365;CL:0002057!4.08e-09!42;CL:0000134!6.55e-09!358;CL:0000034!7.57e-09!444;CL:0000219!1.20e-08!390;CL:0000048!3.36e-08!430;CL:0000723!7.67e-08!436;CL:0000860!1.27e-07!45 | |ontology_enrichment_celltype=CL:0002320!2.61e-09!365;CL:0002057!4.08e-09!42;CL:0000134!6.55e-09!358;CL:0000034!7.57e-09!444;CL:0000219!1.20e-08!390;CL:0000048!3.36e-08!430;CL:0000723!7.67e-08!436;CL:0000860!1.27e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-13;33!CL:0002057;1.36e-13;33!CL:0000473;1.89e-08;39!CL:0000234;1.89e-08;39!CL:0000576;9.38e-08;48!CL:0000182;4.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.09e-14,42;CL:0002057,4.09e-14,42;CL:0000473,1.77e-11,48;CL:0000234,1.77e-11,48;CL:0000766,1.02e-10,72;CL:0002194,1.22e-09,59;CL:0000576,1.22e-09,59;CL:0000040,1.22e-09,59;CL:0000559,1.22e-09,59;CL:0002009,4.19e-09,61;CL:0000557,1.89e-08,67;CL:0000839,6.40e-08,66;CL:0000182,2.36e-07,12;CL:0000048,5.35e-07,427;CL:0000134,5.58e-07,354;CL:0000034,7.54e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.71e-09!375;UBERON:0002405!3.85e-08!115;UBERON:0005057!5.63e-07!26 | |ontology_enrichment_uberon=UBERON:0002384!4.71e-09!375;UBERON:0002405!3.85e-08!115;UBERON:0005057!5.63e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.41e-09;19!UBERON:0006925;3.41e-09;19!UBERON:0002423;2.13e-07;25!UBERON:0002365;7.16e-07;31!UBERON:0002330;7.16e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.17e-11,82;UBERON:0004765,1.96e-09,90;UBERON:0002107,2.84e-09,19;UBERON:0006925,2.84e-09,19;UBERON:0008836,2.84e-09,19;UBERON:0008835,5.56e-09,22;UBERON:0003894,5.56e-09,22;UBERON:0002371,8.79e-09,76;UBERON:0007499,9.00e-09,25;UBERON:0009854,1.92e-08,23;UBERON:0009856,2.70e-08,26;UBERON:0001434,2.85e-08,100;UBERON:0002405,3.01e-08,93;UBERON:0009497,1.67e-07,25;UBERON:0000015,1.67e-07,25;UBERON:0002423,1.67e-07,25;UBERON:0006235,1.67e-07,25;UBERON:0004161,1.67e-07,25;UBERON:0002390,1.72e-07,98;UBERON:0003061,1.72e-07,98;UBERON:0002365,2.44e-07,31;UBERON:0002330,2.44e-07,31 | |||
|phase1_expression=1.45342703416445,1.49870366723688,0.140954404095971,0,0.446961094427288,0,0,3.15859936713415,0,0.982935746006035,0,0.218441372130172,0.791300934685361,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0,0.273748850145768,0.251085279189606,0,0,0,1.57345710739562,1.15148819429164,0.619264493264304,0,0,0,0,0.426507697462265,0.587200878669695,1.66198622559563,3.20871115952227,1.08505435357926,0.447830948479849,0,0.257575567634187,0,0.755751887377619,0.485168122375632,2.32429036905685,2.05583944010913,4.33588919253145,2.01384674625505,0.256160706529101,1.6553756092201,1.37898272294647,0.645484683583826,5.41705946377367,0.752969358170419,1.09162460023138,1.57306439111559,4.28517449319264,2.24650318953266,1.91801137739712,0.989553900560148,0.398927315243264,1.70489900213078,14.8006711700578,17.0215567407342,23.6672454618319,0,1.0429658368404,0.868755378820466,18.7673845816344,5.52416453981347,16.7725065343669,0,0.425208599930087,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,1.68152568894461,0.790152254325231,0,0.393010762749165,0,1.33749196312542,0.651844533267181,0.946895611469467,0,2.33961959458865,2.3568472597987,1.77227115666897,0.812411591295047,3.97083091149593,4.29195846947598,2.95988228286617,3.03985019564433,0,0.296573126324121,0.267540828089713,1.04535523804977,0.679856056185397,0.766440987203842,0,1.01207876807801,0.318565414324097,0,0.950452044448374,0.752875595388864,0.511946444617674,0,0.236777252044017,0,0,0.267440195783507,0.289648807765598,0,1.34140171940727,0,0,0,0,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,1.90792499444274,1.71598473234038,1.85728750664782,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0.326923806226917,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,1.1409436430889,1.64393548606981,1.17434498643765,1.13311061057692,0.702254033511242,0.408308342509787,0.737005903870608,0.309977343527296,1.18800285728205,0,0.910161361938026,1.43723628363248,0,0.375355559615893,0.277064115484183,1.31693286264251,0,0,0.113432183160021,1.4351170855109,0.85422955527427,1.48352330811693,1.80054657650641,0.309157587715317,0.515281080091258,1.30281799432113,1.5189869901714,1.46155507741798,1.26216887122057,0.368199594569197,0.484938170456436,1.06502877754984,0.503760491138201,0,0.386521706326594,0,0,0.365921118388786,1.19276791489337,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,1.26755034821831,2.94848165003288,1.77236972004421,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0,2.37061319387782,0.858486162094873,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.36669142910475,0,3.57656445851882,1.690605505112,0,0,1.28603687131071,1.41849132023278,1.3321108950805,1.00084595560703,0.542621605391443,0.823240336780769,0.977208552881205,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,1.84928690295345,1.25342674267927,1.2329365839288,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0.36807447515742,0,0.542530047399471,0,0,0.315404830067869,0.117141414992713,0.601892199455438,0,0,0,0.737476674166813,0.0868836144680828,0.195801157462741,0.686286847621712,0.206768026122887,0,0.533637789017222,0,0,0,0.744323423456331,0.460385919864187,0.841980283299221,0.256278298511402,1.02341449813341,0.64341568457443,0,0.616838775210622,0.532685175939381,0.574890092096664,0,0.116210378459959,0,0.802025881213139,0,0.114814448164607,0,0.655622074797121,0.902399225814824,0.770153371044148,0.784349769176855,0,0.527758144464379,0,0,0.431831832204279,0,0.270946437543853,1.50506932156456,0,0,0.447749509444357,0,0,0,0,1.30151357865721,2.26690225624989,4.2121953816438,3.30037999682352,0,0,0,0.290012154876366,1.3864375540318,1.38153307253517,1.10269257987624,0.859361958946189,0.290033387828457,0.511359764496605,0.0890320356467374,0.165284915360978,0,0.382838137483752,0,0,0.62962469366128,2.0911118104818,0,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,0.953150969619124,0.511795582622668,0.42793898803392,0.636406495851874,0,0.539617372749944,0,1.06031162111118,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.818999468447914,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0.349934720244983,0.0962221127255121,0,0,1.31801321087491,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.411362273086194,2.59389324477087,0.54003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| ||
|short_description=p3@HS3ST3B1 | |short_description=p3@HS3ST3B1 | ||
}} | }} |
Latest revision as of 17:25, 18 September 2015
Short description: | p3@HS3ST3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HS3ST3B1_5end |
Coexpression cluster: | C3605_CD14_adult_liver_Eosinophils_CD4_Dendritic_anaplastic |
Association with transcript: | -46bp_to_ENST00000360954, ENST00000466596_5end |
EntrezGene: | HS3ST3B1 |
HGNC: | 5198 |
UniProt: | Q9Y662 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.09e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.09e-14 | 42 |
defensive cell | 1.77e-11 | 48 |
phagocyte | 1.77e-11 | 48 |
myeloid leukocyte | 1.02e-10 | 72 |
monopoietic cell | 1.22e-09 | 59 |
monocyte | 1.22e-09 | 59 |
monoblast | 1.22e-09 | 59 |
promonocyte | 1.22e-09 | 59 |
macrophage dendritic cell progenitor | 4.19e-09 | 61 |
granulocyte monocyte progenitor cell | 1.89e-08 | 67 |
myeloid lineage restricted progenitor cell | 6.40e-08 | 66 |
hepatocyte | 2.36e-07 | 12 |
multi fate stem cell | 5.35e-07 | 427 |
mesenchymal cell | 5.58e-07 | 354 |
stem cell | 7.54e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.17e-11 | 82 |
skeletal element | 1.96e-09 | 90 |
liver | 2.84e-09 | 19 |
digestive gland | 2.84e-09 | 19 |
liver bud | 2.84e-09 | 19 |
hepatic diverticulum | 5.56e-09 | 22 |
liver primordium | 5.56e-09 | 22 |
bone marrow | 8.79e-09 | 76 |
epithelial sac | 9.00e-09 | 25 |
digestive tract diverticulum | 1.92e-08 | 23 |
sac | 2.70e-08 | 26 |
skeletal system | 2.85e-08 | 100 |
immune system | 3.01e-08 | 93 |
epithelium of foregut-midgut junction | 1.67e-07 | 25 |
anatomical boundary | 1.67e-07 | 25 |
hepatobiliary system | 1.67e-07 | 25 |
foregut-midgut junction | 1.67e-07 | 25 |
septum transversum | 1.67e-07 | 25 |
hematopoietic system | 1.72e-07 | 98 |
blood island | 1.72e-07 | 98 |
exocrine gland | 2.44e-07 | 31 |
exocrine system | 2.44e-07 | 31 |