FFCP PHASE1:Hg19::chr21:45499584..45499588,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:45499584..45499588,+
|short_description=p4@TRAPPC10
|description=CAGE_peak_4_at_TRAPPC10_5end
|association_with_transcript=-85bp_to_ENST00000461889_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7109 | |EntrezGene=7109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11868 | |HGNC=11868 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000461889_5end | |||
|cluster_id=chr21:45499584..45499588,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_TRAPPC10_5end | |||
|id=chr21:45499584..45499588,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.63e-08!52;CL:0000542!9.47e-08!53;CL:0000051!9.47e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.06e-10;3!CL:0000222;1.97e-08;1!CL:0002601;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.48e-10,3;CL:0002601,1.71e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.64e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.60e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.70e-23;15!UBERON:0000179;4.70e-23;15!UBERON:0000463;4.70e-23;15!UBERON:0002390;4.38e-13;32!UBERON:0002331;4.88e-12;10!UBERON:0000478;1.94e-10;24!UBERON:0001987;5.04e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.45e-23,15;UBERON:0000179,3.45e-23,15;UBERON:0000463,3.45e-23,15;UBERON:0002331,5.98e-12,10;UBERON:0000358,5.98e-12,10;UBERON:0000307,5.98e-12,10;UBERON:0000091,5.98e-12,10;UBERON:0000087,5.98e-12,10;UBERON:0007010,5.98e-12,10;UBERON:0007806,5.98e-12,10;UBERON:0008780,5.98e-12,10;UBERON:0005728,5.98e-12,10;UBERON:0000478,1.95e-10,24;UBERON:0001987,3.94e-08,4;UBERON:0004340,3.94e-08,4 | |||
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| ||
|short_description=p4@TRAPPC10 | |||
}} | }} |
Latest revision as of 17:36, 18 September 2015
Short description: | p4@TRAPPC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRAPPC10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -85bp_to_ENST00000461889_5end |
EntrezGene: | TRAPPC10 |
HGNC: | 11868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.48e-10 | 3 |
uterine smooth muscle cell | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.45e-23 | 15 |
haemolymphatic fluid | 3.45e-23 | 15 |
organism substance | 3.45e-23 | 15 |
umbilical cord | 5.98e-12 | 10 |
blastocyst | 5.98e-12 | 10 |
blastula | 5.98e-12 | 10 |
bilaminar disc | 5.98e-12 | 10 |
inner cell mass | 5.98e-12 | 10 |
cleaving embryo | 5.98e-12 | 10 |
connecting stalk | 5.98e-12 | 10 |
inner cell mass derived epiblast | 5.98e-12 | 10 |
extraembryonic mesoderm | 5.98e-12 | 10 |
extraembryonic structure | 1.95e-10 | 24 |
placenta | 3.94e-08 | 4 |
allantois | 3.94e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.60e-07 | 10 |