FFCP PHASE1:Hg19::chr2:85922031..85922057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10578 | |EntrezGene=10578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4414 | |HGNC=4414 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000491234_5end | |association_with_transcript=4bp_to_ENST00000491234_5end | ||
|cluster_id=chr2:85922031..85922057,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_5_at_GNLY_5end | |description=CAGE_peak_5_at_GNLY_5end | ||
|id=chr2:85922031..85922057,+ | |id=chr2:85922031..85922057,+ | ||
|ontology_enrichment_celltype=CL:0000791!8.49e-29!18;CL:0000789!8.49e-29!18;CL:0002420!8.49e-29!18;CL:0002419!8.49e-29!18;CL:0000790!8.49e-29!18;CL:0000625!1.28e-27!11;CL:0000084!1.76e-25!25;CL:0000827!1.76e-25!25;CL:0000738!3.71e-16!140;CL:0002087!1.09e-15!119;CL:0000838!1.66e-14!52;CL:0000542!3.97e-14!53;CL:0000051!3.97e-14!53;CL:0002031!1.76e-11!124;CL:0000037!2.99e-11!172;CL:0000566!2.99e-11!172;CL:0000988!4.30e-10!182;CL:0000623!5.01e-09!3;CL:0000825!5.01e-09!3;CL:0002032!7.81e-09!165;CL:0000837!7.81e-09!165;CL:0000767!1.34e-08!3;CL:0000842!1.94e-08!3 | |ontology_enrichment_celltype=CL:0000791!8.49e-29!18;CL:0000789!8.49e-29!18;CL:0002420!8.49e-29!18;CL:0002419!8.49e-29!18;CL:0000790!8.49e-29!18;CL:0000625!1.28e-27!11;CL:0000084!1.76e-25!25;CL:0000827!1.76e-25!25;CL:0000738!3.71e-16!140;CL:0002087!1.09e-15!119;CL:0000838!1.66e-14!52;CL:0000542!3.97e-14!53;CL:0000051!3.97e-14!53;CL:0002031!1.76e-11!124;CL:0000037!2.99e-11!172;CL:0000566!2.99e-11!172;CL:0000988!4.30e-10!182;CL:0000623!5.01e-09!3;CL:0000825!5.01e-09!3;CL:0002032!7.81e-09!165;CL:0000837!7.81e-09!165;CL:0000767!1.34e-08!3;CL:0000842!1.94e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;8.04e-70;11!CL:0000791;6.28e-42;18!CL:0000789;6.28e-42;18!CL:0002419;6.28e-42;18!CL:0000084;3.25e-35;25!CL:0000623;4.34e-21;3!CL:0000542;4.87e-13;53!CL:0000767;6.13e-10;3!CL:0000226;1.44e-09;3!CL:0000842;1.44e-09;3!CL:0002087;9.35e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.77e-70,11;CL:0000791,4.59e-42,18;CL:0000789,4.59e-42,18;CL:0002420,4.59e-42,18;CL:0002419,4.59e-42,18;CL:0000790,4.59e-42,18;CL:0000084,2.58e-35,25;CL:0000827,2.58e-35,25;CL:0000838,1.98e-25,52;CL:0000542,6.81e-25,53;CL:0000051,6.81e-25,53;CL:0000623,4.65e-21,3;CL:0000825,4.65e-21,3;CL:0000738,6.50e-17,136;CL:0002087,1.62e-16,115;CL:0000037,6.54e-13,168;CL:0002031,3.33e-12,120;CL:0000988,4.81e-12,177;CL:0002032,8.72e-11,161;CL:0000837,8.72e-11,161;CL:0000767,6.55e-10,3;CL:0000226,1.38e-09,3;CL:0000842,1.38e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.28e-42;18!CL:0000051;4.87e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.34e-22!15;UBERON:0000179!2.34e-22!15;UBERON:0000463!2.34e-22!15;UBERON:0007023!1.17e-14!115;UBERON:0002390!1.23e-10!102;UBERON:0003061!1.23e-10!102;UBERON:0002193!7.03e-10!112;UBERON:0002298!2.59e-09!8;UBERON:0001896!1.86e-07!3;UBERON:0005290!1.86e-07!3;UBERON:0010096!1.86e-07!3;UBERON:0001049!9.03e-07!57;UBERON:0005068!9.03e-07!57;UBERON:0006241!9.03e-07!57;UBERON:0007135!9.03e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-33;15!UBERON:0000179;3.36e-33;15!UBERON:0000463;3.36e-33;15!UBERON:0002390;1.46e-14;32!UBERON:0002193;1.56e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.95e-33,15;UBERON:0000179,2.95e-33,15;UBERON:0000463,2.95e-33,15 | |||
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| ||
|short_description=p5@GNLY | |short_description=p5@GNLY | ||
}} | }} |
Latest revision as of 17:49, 18 September 2015
Short description: | p5@GNLY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GNLY_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 4bp_to_ENST00000491234_5end |
EntrezGene: | GNLY |
HGNC: | 4414 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.77e-70 | 11 |
mature alpha-beta T cell | 4.59e-42 | 18 |
alpha-beta T cell | 4.59e-42 | 18 |
immature T cell | 4.59e-42 | 18 |
mature T cell | 4.59e-42 | 18 |
immature alpha-beta T cell | 4.59e-42 | 18 |
T cell | 2.58e-35 | 25 |
pro-T cell | 2.58e-35 | 25 |
lymphoid lineage restricted progenitor cell | 1.98e-25 | 52 |
lymphocyte | 6.81e-25 | 53 |
common lymphoid progenitor | 6.81e-25 | 53 |
natural killer cell | 4.65e-21 | 3 |
pro-NK cell | 4.65e-21 | 3 |
leukocyte | 6.50e-17 | 136 |
nongranular leukocyte | 1.62e-16 | 115 |
hematopoietic stem cell | 6.54e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 3.33e-12 | 120 |
hematopoietic cell | 4.81e-12 | 177 |
hematopoietic oligopotent progenitor cell | 8.72e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.72e-11 | 161 |
basophil | 6.55e-10 | 3 |
single nucleate cell | 1.38e-09 | 3 |
mononuclear cell | 1.38e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.95e-33 | 15 |
haemolymphatic fluid | 2.95e-33 | 15 |
organism substance | 2.95e-33 | 15 |