FFCP PHASE1:Hg19::chrX:100667014..100667033,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5042 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=41bp_to_HQ258235,HQ258406_5end | |||
|cluster_id=chrX:100667014..100667033,+ | |||
|description=CAGE_peak_3_at_HNRNPH2_5end | |||
|id=chrX:100667014..100667033,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.65e-21!45;CL:0002057!2.04e-20!42;CL:0002009!2.60e-15!65;CL:0002194!4.25e-15!63;CL:0000576!4.25e-15!63;CL:0000040!4.25e-15!63;CL:0000559!4.25e-15!63;CL:0000839!5.18e-13!70;CL:0000557!2.33e-12!71;CL:0000766!1.86e-11!76;CL:0000763!4.78e-08!112;CL:0000049!4.78e-08!112;CL:0002087!2.69e-07!119;CL:0002031!6.31e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.93e-31;33!CL:0002057;2.93e-31;33!CL:0000473;5.69e-23;39!CL:0000234;5.69e-23;39!CL:0000576;3.24e-17;48!CL:0000766;1.69e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-33,42;CL:0002057,3.92e-33,42;CL:0000473,2.49e-30,48;CL:0000234,2.49e-30,48;CL:0002194,3.54e-21,59;CL:0000576,3.54e-21,59;CL:0000040,3.54e-21,59;CL:0000559,3.54e-21,59;CL:0002009,5.13e-20,61;CL:0000839,1.85e-18,66;CL:0000766,3.36e-17,72;CL:0000557,5.63e-17,67;CL:0000763,3.08e-10,108;CL:0000049,3.08e-10,108;CL:0002087,2.38e-08,115;CL:0002031,5.73e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.84e-10!80;UBERON:0001474!6.25e-09!86;UBERON:0004765!1.09e-08!101;UBERON:0001434!1.09e-08!101;UBERON:0002390!5.04e-08!102;UBERON:0003061!5.04e-08!102;UBERON:0002204!6.92e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.19e-13,76;UBERON:0001474,1.78e-11,82;UBERON:0002405,6.69e-10,93;UBERON:0002390,2.08e-09,98;UBERON:0003061,2.08e-09,98;UBERON:0004765,2.21e-09,90;UBERON:0002204,4.22e-08,167;UBERON:0002193,5.69e-08,108;UBERON:0001434,7.68e-08,100 | |||
|phase1_expression=0.181678379270557,2.78330681058278,0.845726424575827,0,1.34088328328186,2.61701557230111,0,0.631719873426831,0.261185628199839,0,0,0,0,0.74259811776028,0.994192127183747,2.01697543935533,0,0.730310090387373,1.95173119516203,0,0,0,0.572471974262113,1.50561867580173,1.38096903554283,0.534893840235659,0.410502947249729,0.629686250509434,0,0.383829398097213,0.309632246632152,0,0,1.10926203050036,0.232401601740905,0,0.293600439334847,0.553995408531877,1.60435557976113,1.30206522429511,0.223915474239924,0.647787332037959,0.257575567634187,4.65274364094607,3.77875943688809,2.66842467306598,6.97287110717054,3.28934310417461,3.40677007984614,7.48000220037591,3.84241059793651,7.09446689665756,4.13694816883942,3.87290810150296,5.41705946377367,3.9530891303947,4.36649840092553,3.82029923556644,6.42776173978895,2.88836124368484,1.91801137739712,9.23583640522805,4.58766412529753,5.11469700639233,8.41606792022894,3.40431134814684,4.35975574296902,5.52747063564835,3.65038042894141,3.25783267057675,4.84319602106695,5.52416453981347,6.32924774881769,2.5350634357433,1.70083439972035,0.419317291016752,0.561643155732475,1.05123824989054,1.28580469357664,0,1.59133341759272,0.730656615058536,0,0.546138611262131,0,0.426730222566507,1.20118796110804,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,1.96505381374582,1.43921049299656,1.33749196312542,0.977766799900771,0.946895611469467,0,0.891283655081389,1.17842362989935,1.77227115666897,0.812411591295047,1.0247305578054,0.520237390239513,0.822189523018381,0.276350017785848,0.579606171470105,0.444859689486181,0.267540828089713,1.04535523804977,0.226618685395132,1.14966148080576,0,0,0.318565414324097,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,0,1.87208137048455,0.289648807765598,0,0,0.255725123687061,0.361439152384566,1.00267582127178,1.01392563272577,1.5905718941022,1.45990461090791,0.850813354476611,0.443458794925128,0.43917392846563,0.458426764241994,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0,0.74291500265913,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,1.10047216776027,0.208994966536811,0.775250277507987,0,0,0,0,0.488124115096339,0,1.62028389576352,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.506522046658319,0.529636723252875,0.573673241497627,2.12801029319014,0,0,0.98667019366864,0,1.75123873690594,0.653847612453835,0.151357427644931,0,0,0,0,0.747243402759005,0.939475989150119,0.809364721840658,0.421352420106746,0.204154171254893,1.22834317311768,1.23990937410919,0,1.97813543422845,0,0,0.168336113954066,0.750711119231785,0.277064115484183,0,0.919463387397059,0.901428353439581,0.340296549480063,1.61450672119976,0.213557388818567,0.847727604638247,1.80054657650641,0.515262646192195,1.8034837803194,0.18611685633159,0.675105328965065,0.68205903612839,1.00973509697646,0.0920498986422993,1.61646056818812,0,0.705264687593482,0.67824236924195,0.193260853163297,0.272746120590835,0.286804595389004,0.487894824518382,0.397589304964456,0.580969714347592,0.310983165046111,1.00928340350251,1.45990943630332,1.56449532329816,5.14592750554308,0,0.928735856063958,2.16563844500876,1.0647612003586,2.69735504124963,1.20505514941741,1.10293972732394,0.871517776369625,2.37270619111097,1.61797569792197,1.96221465125346,2.69323009862473,0.738155454624648,0,0.4115740113314,0,0,2.94848165003288,0,0.441463099414651,0.491953754172454,0.171567810298526,0.329250856225877,0,0.603173834469785,0.277765335475589,0,0,0,0.231860809950154,0.234817388471643,0.577465791044295,0,1.52203321787679,0,0.858486162094873,0.738651018262192,0,0.445893486866185,0,0.671928512795438,0.992425680696705,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.176096868026452,0,0.432359860250884,0.50496973370552,0.444485260045183,0.381988425558278,0,0,0.822619941626588,1.50171528921959,0.857479297891735,0,0.43596006883328,0.2933531432838,0,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,1.42156779497018,1.58390374586686,0,0.871533458600294,0.599837947092342,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,1.14861935834114,0,0.289562613335158,2.26023954805422,0.358121926479791,0.112085143993527,0.197030760201927,0.862510299438069,0.898401253958239,0.254094624222463,0,0,0.502548796003046,1.27587750330633,2.24702107184155,14.9580729602012,0.828831026872071,0.613457458595699,0,0.542530047399471,0.623912584592421,1.60586089917446,1.10391690523754,0.585707074963566,0,0,0,0,0.184369168541703,1.21637060255316,0,0,0.413536052245775,0.862856803274467,0.533637789017222,0.303127571446259,0,0,0.496215615637554,0.767309866440312,1.68396056659844,0.768834895534206,0,0,0,0.925258162815933,0.355123450626254,0.164254312027618,2.07701771673448,0.697262270759755,0.604297247958111,0.802025881213139,1.01289087829486,0.574072240823034,0.910455840033585,1.04899531967539,0.451199612907412,0.308061348417659,0,0,0.527758144464379,0,0.340187410553031,0.647747748306418,3.08454505380579,0.541892875087706,0,0.254876273045038,0,0,1.31555925987561,0.522870902049801,1.28225062558195,0,1.95227036798582,0.515205058238611,0.457847324091717,0.41254749960294,1.14853107599234,1.30012049207304,0,0.193341436584244,1.07834031980251,0.921022048356777,0.964856007391714,0.429680979473094,1.74020032697074,0.596586391912706,0.534192213880424,0.495854746082934,0.576570202095319,0.255225424989168,0.30347334256665,0.929691098594572,0.94443704049192,0,0,0,0,0.37064843820784,1.14499909393593,0,0.316379424718726,0.571890581771475,0.255897791311334,1.71175595213568,0.318203247925937,0.78494864019923,0.899362287916574,0.823611089208164,0.824686816419805,0.202182481573316,1.58510321173008,2.10629228119491,0,1.70599442741899,2.11300293513511,0.409499734223957,1.83827061539827,3.39024349860728,0,1.32687795048244,2.19225442626881,0,0.655894752046633,0.202910376962704,0,0,0.573645408816206,0.196498082026242,0,0.354761064070598,0.422215270595328,1.31717957183961,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,2.37937552888281,0.640944426764839,0,0,0.185803175125719,0.28853842595289,0,0.318852545457645,1.39705560002972,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.846458889008016,1.1241165257259,0.605399121573143,0,0.687010689511529,0.614481528616916,0.223676107892416,0.500547425135725,0.390776190804081,0.835218521685727,1.23087398947712,1.08182271390393,0.33307196799782,0,0.18714054040822,0.439524537815682,0.36408156524854,0.111443384277478,0.284136146806413,0.47748896947538,0.890894042497916,0.614321404198464,0,1.1253553312841,0.222617410045812,0.494411622680279,0.211125408127993,0.19924798825107,1.10513566212459,1.0077309914171,0.613612095012929,0.369254416383208,0.311039587661807,0.0898683511473268,0.358042349351218,0,0.295930216910801,0,0,0.969332746095218,1.20598527610407,1.99613798001194,1.04171104434093,0.174919999992391,0,0.455173793141999,0.254253650292766,0.236387681767936,1.72371686620732,0.291604613383254,1.04174996959975,0.885741385813839,1.80894657938112,0,1.10579259931225,0.295547618953547,2.63262476584767,0.435753854075961,0,0.384751292518985,0.227884111694002,0,0.448788222048861,0.108647371922008,0.638002319463839,0.457987967009312,1.06606955203727,0,0.784901281975124,0.166211681900156,0.451191321234361,0.588187602953219,1.00692952185506,0.37950746544837,0,0.843992258112108,0.652931232636591,0.282706142867882,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0.134802265961354,1.60515529459758,2.81117334870407,2.18945747058799,0.391329237864179,0.728341138602278,1.97292201424695,1.20990716048664,1.83643656978294,0.189559738885464,0.300646838828985,0.518440956986236,1.32930774541437,0.992975867626496,0.313932918407225,0,0,0.138674673013139,1.56203764501618,0,0.174118413160805,1.7472666824203,0.859930162358083,1.9351266257817,0.950161122120412,1.88865551222381,0.581934098930517,0.176512253383001,1.80784592624426,0.274083849293502,0.19871461170299,0.189932387867636,0.586654148204409,0.320635281006135,1.06726497369676,1.19885765749278,0.288180834308212,0.229073192331831,1.20116498503375,0,0.124252535565433,0,0,0.104602846312333,0.509991088181609,0.288950589901519,0,1.09524303113594,0,0.859530882839914,0.525774708558629,0.837847203816763,0.916641696046735,2.15361907373044,0.798716001995964,0.858452096273142,0,0.134366944973453,0.360299883542404,0,0.551482276150566,0.659326867049332,0.741438982396034,0.295282444544246,0.423366660328922,0.795229689809303,1.49823746722733,1.28602518772015,0.825236619583403,2.49264202817511,0.899895566206002,0.77380195455795,0.182248669974074,0.335434687599266,0.394028536495991,0.209818352539992,0.105600336519406,0.717149357331379,0.383830394638891,0,0,0,2.17199840701485,3.45688596480507,2.61269888087527,0,0.164185041498678,0.340776043570843,0.113312091520126,0.58620893471233,0,0.517131825446202,1.85125642439766,0.513260513652988,0,0.320362237703084,0.78602152549833,0.828478110694391,0,0.790446527591777,0.730755590285376,0,0,0.2506898940227,0.306345576763462,1.31149052283922,0.157054096250234,0.886068179966986,3.17268288745104,0.876336514945499,0.573409195690071,0.776503360757966,0.124192805882767,0.415045904808692,0.249960815924213,0.303298235083296,0.285465333544967,1.41159491818903,0.936669811613763,0.724605143054126,0.597019211547496,0.934853239388898,1.10961172300523,0.947015026375446,0.754703705257725,0.889811221596536,0,0.907385542579434,0.466311601748341,0.887130899937803,1.27437413730962,0.449803112163605,0.310525913752519,1.24411862352257,0.53168342911599,0,0.450772826991655,2.28483127301277,1.22061219961398,0.363697318405119,0.322231671127465,0,0.398095888698616,2.80019435264208,1.37358282073117,0,0,0.57785949122191,0,1.04397716786085,0.906823702049089,0.694567422971502,0.734210113519403,0.537266523244462,0.926404341482917,0.438568099157414,0.176689145945881,0.38582807654183,0.844712203265363,0.76872455576384,1.0362910251936,1.21543982470953,1.24432592536558,0.974301544196942,0.664324201566815,0.981392365535065,1.31043939538565,0.491545817507439,0.422624246717254,0.19998739585493,0.426766918776564,0.688859918643263,0,0.184105950251841,0.279759015438889,1.86623178009892,0,0.431299245586727,0.471797825567689,0.109209638192014,0.169732529954025,0.212574920101683,0.743614585554013,0,0.636008701306837,0.23658523500376,0.80057074828547,0.352675943690684,1.2249819094128,0.128458450192919,1.41696576325585,0.957803154342908,3.07674546361133,0.504143392443436,0,0.968853873791107,0,0.0981477185010256,0.11796972334774,3.4851433719119,0.115525666150338,0.381382095467167,0,0.198916222116275,0.601682626794058,0.20170506870352,0.781514011233092,0.523813388962845,2.62035068016155,0.295712172434091,0.270150338473579,0.781078098613847,1.2401207790071,0.0634158101939068,0.546974809018219,1.64477330057155,1.48863353516788,0,0.255524855279191,0.535701835878287,0.336283722218824,0.606965604236632,0.682986574053893,0.177404740325278,0.460935950223117,0.171488009437418,0.475788130837822,0.263091094251396,0.472775363535873,0.333694205676207,0.235479278551542,1.41404030924402,0,0,1.07963795609311,0.47775168788705,0.0714765441766563,0.790068058663633,0.23248285073625,0,0,0.207216164163037,0.3414369541879,0,0.430227358820278,0.591660003652827,0.255640214277473,0.846774100381858,2.7492824225286,1.5510319283216,0.955538938977433,1.00669888618013,0.098150233615243,0.243835849964539,1.94228651156368,0,2.3196288626764,1.45713297917742,1.16969731731053,0.795803100645473,0.83244063544298,0,0.659643100472575,0.150962843566674,0.617393264863557,3.0598338470554,0.470317296361523,0.980593287015622,0.235676547101626,1.57046773691956,0,0.4226557275834,0.169927114687817,0.563903507879121,0.257831551894309,0.399764623699716,0.535661815816973,0,0.481448200135009,0,0.458729283404541,0.716697915757256,0.473314686579554,0.135982980381829,0.872701380680755,2.645134202577,1.11598505450025,2.31087814315709,2.16313281061895,0.378499274505237,0.655593431782173,0.506794004045748,0.305966489225945,0.534434810531121,0.36757959813938,2.75778293221613,0.378893491091197,0.267964130156178,0,0.724030971033267,1.91910583710883,1.66645102024618,0.387533459016037,0.186224142887574,0.448527450322454,0.318235791390825,0.404234377916439,3.26575121845442,0.342233301085281,0.0673520530145875,0.215166616178029,0.332660356546013,0.0814032686109745,0.320182037633146,0,0.179650404213174,2.34640942403454,0,0.813792356631477,0,0.805095174364105,0 | |||
|short_description=p3@HNRNPH2 | |||
}} |
Latest revision as of 18:10, 18 September 2015
Short description: | p3@HNRNPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRNPH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_HQ258235, HQ258406_5end |
EntrezGene: | HNRNPH2 |
HGNC: | 5042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.92e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-33 | 42 |
defensive cell | 2.49e-30 | 48 |
phagocyte | 2.49e-30 | 48 |
monopoietic cell | 3.54e-21 | 59 |
monocyte | 3.54e-21 | 59 |
monoblast | 3.54e-21 | 59 |
promonocyte | 3.54e-21 | 59 |
macrophage dendritic cell progenitor | 5.13e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.85e-18 | 66 |
myeloid leukocyte | 3.36e-17 | 72 |
granulocyte monocyte progenitor cell | 5.63e-17 | 67 |
myeloid cell | 3.08e-10 | 108 |
common myeloid progenitor | 3.08e-10 | 108 |
nongranular leukocyte | 2.38e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.73e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.19e-13 | 76 |
bone element | 1.78e-11 | 82 |
immune system | 6.69e-10 | 93 |
hematopoietic system | 2.08e-09 | 98 |
blood island | 2.08e-09 | 98 |
skeletal element | 2.21e-09 | 90 |
musculoskeletal system | 4.22e-08 | 167 |
hemolymphoid system | 5.69e-08 | 108 |
skeletal system | 7.68e-08 | 100 |