FFCP PHASE1:Hg19::chr18:11851403..11851428,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57132 | |EntrezGene=57132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24287 | |HGNC=24287 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000526991_5end | |association_with_transcript=-10bp_to_ENST00000526991_5end | ||
|cluster_id=chr18:11851403..11851428,+ | |||
|coexpression_cluster_id=C290 | |coexpression_cluster_id=C290 | ||
|description=CAGE_peak_1_at_CHMP1B_5end | |description=CAGE_peak_1_at_CHMP1B_5end | ||
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|ontology_enrichment_celltype=CL:0000860!3.83e-27!45;CL:0002057!7.46e-27!42;CL:0000766!4.24e-22!76;CL:0000738!1.42e-21!140;CL:0000557!2.10e-18!71;CL:0002009!5.78e-18!65;CL:0000839!9.16e-18!70;CL:0002194!8.07e-17!63;CL:0000576!8.07e-17!63;CL:0000040!8.07e-17!63;CL:0000559!8.07e-17!63;CL:0002031!8.63e-16!124;CL:0002087!2.40e-14!119;CL:0000037!8.60e-12!172;CL:0000566!8.60e-12!172;CL:0000763!2.54e-10!112;CL:0000049!2.54e-10!112;CL:0002032!5.12e-10!165;CL:0000837!5.12e-10!165;CL:0000988!5.06e-09!182 | |ontology_enrichment_celltype=CL:0000860!3.83e-27!45;CL:0002057!7.46e-27!42;CL:0000766!4.24e-22!76;CL:0000738!1.42e-21!140;CL:0000557!2.10e-18!71;CL:0002009!5.78e-18!65;CL:0000839!9.16e-18!70;CL:0002194!8.07e-17!63;CL:0000576!8.07e-17!63;CL:0000040!8.07e-17!63;CL:0000559!8.07e-17!63;CL:0002031!8.63e-16!124;CL:0002087!2.40e-14!119;CL:0000037!8.60e-12!172;CL:0000566!8.60e-12!172;CL:0000763!2.54e-10!112;CL:0000049!2.54e-10!112;CL:0002032!5.12e-10!165;CL:0000837!5.12e-10!165;CL:0000988!5.06e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.97e-20;33!CL:0002057;3.97e-20;33!CL:0000473;4.12e-14;39!CL:0000234;4.12e-14;39!CL:0000576;3.65e-13;48!CL:0000766;5.74e-11;69 | |ontology_enrichment_celltype_v019=CL:0000860;3.97e-20;33!CL:0002057;3.97e-20;33!CL:0000473;4.12e-14;39!CL:0000234;4.12e-14;39!CL:0000576;3.65e-13;48!CL:0000766;5.74e-11;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.46e-27,42;CL:0002057,7.46e-27,42;CL:0000473,5.03e-23,48;CL:0000234,5.03e-23,48;CL:0000766,2.28e-21,72;CL:0000738,9.43e-21,136;CL:0000557,1.13e-17,67;CL:0002009,2.99e-17,61;CL:0000839,4.94e-17,66;CL:0002194,4.18e-16,59;CL:0000576,4.18e-16,59;CL:0000040,4.18e-16,59;CL:0000559,4.18e-16,59;CL:0002031,4.95e-15,120;CL:0002087,1.32e-13,115;CL:0000037,3.98e-11,168;CL:0000763,1.19e-09,108;CL:0000049,1.19e-09,108;CL:0002032,2.15e-09,161;CL:0000837,2.15e-09,161;CL:0000988,9.42e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-19;42 | |ontology_enrichment_development_v019=CL:0002057;1.51e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.08e-15!102;UBERON:0003061!4.08e-15!102;UBERON:0002371!1.01e-14!80;UBERON:0002193!2.86e-13!112;UBERON:0001474!7.68e-12!86;UBERON:0004765!2.95e-11!101;UBERON:0001434!2.95e-11!101;UBERON:0002405!4.41e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!4.08e-15!102;UBERON:0003061!4.08e-15!102;UBERON:0002371!1.01e-14!80;UBERON:0002193!2.86e-13!112;UBERON:0001474!7.68e-12!86;UBERON:0004765!2.95e-11!101;UBERON:0001434!2.95e-11!101;UBERON:0002405!4.41e-09!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.31e-14,98;UBERON:0003061,2.31e-14,98;UBERON:0002371,5.59e-14,76;UBERON:0002193,1.52e-12,108;UBERON:0004765,6.42e-12,90;UBERON:0002405,1.91e-11,93;UBERON:0001474,3.99e-11,82;UBERON:0001434,2.09e-10,100 | |||
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| ||
|short_description=p1@CHMP1B | |short_description=p1@CHMP1B | ||
}} | }} |
Latest revision as of 19:06, 18 September 2015
Short description: | p1@CHMP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHMP1B_5end |
Coexpression cluster: | C290_Eosinophils_CD14_Basophils_Mast_CD4_CD8_immature |
Association with transcript: | -10bp_to_ENST00000526991_5end |
EntrezGene: | CHMP1B |
HGNC: | 24287 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.46e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.46e-27 | 42 |
defensive cell | 5.03e-23 | 48 |
phagocyte | 5.03e-23 | 48 |
myeloid leukocyte | 2.28e-21 | 72 |
leukocyte | 9.43e-21 | 136 |
granulocyte monocyte progenitor cell | 1.13e-17 | 67 |
macrophage dendritic cell progenitor | 2.99e-17 | 61 |
myeloid lineage restricted progenitor cell | 4.94e-17 | 66 |
monopoietic cell | 4.18e-16 | 59 |
monocyte | 4.18e-16 | 59 |
monoblast | 4.18e-16 | 59 |
promonocyte | 4.18e-16 | 59 |
hematopoietic lineage restricted progenitor cell | 4.95e-15 | 120 |
nongranular leukocyte | 1.32e-13 | 115 |
hematopoietic stem cell | 3.98e-11 | 168 |
myeloid cell | 1.19e-09 | 108 |
common myeloid progenitor | 1.19e-09 | 108 |
hematopoietic oligopotent progenitor cell | 2.15e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-09 | 161 |
hematopoietic cell | 9.42e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.31e-14 | 98 |
blood island | 2.31e-14 | 98 |
bone marrow | 5.59e-14 | 76 |
hemolymphoid system | 1.52e-12 | 108 |
skeletal element | 6.42e-12 | 90 |
immune system | 1.91e-11 | 93 |
bone element | 3.99e-11 | 82 |
skeletal system | 2.09e-10 | 100 |