FFCP PHASE1:Hg19::chr21:46221704..46221727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7327 | |EntrezGene=7327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12483 | |HGNC=12483 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462569,ENST00000490091,ENST00000497664_5end | |association_with_transcript=0bp_to_ENST00000462569,ENST00000490091,ENST00000497664_5end | ||
|cluster_id=chr21:46221704..46221727,- | |||
|description=CAGE_peak_1_at_UBE2G2_5end | |description=CAGE_peak_1_at_UBE2G2_5end | ||
|id=chr21:46221704..46221727,- | |id=chr21:46221704..46221727,- | ||
|ontology_enrichment_celltype=CL:0000542!1.74e-12!53;CL:0000051!1.74e-12!53;CL:0000838!3.39e-12!52;CL:0000084!1.17e-09!25;CL:0000827!1.17e-09!25;CL:0000791!1.62e-07!18;CL:0000789!1.62e-07!18;CL:0002420!1.62e-07!18;CL:0002419!1.62e-07!18;CL:0000790!1.62e-07!18;CL:0000037!1.93e-07!172;CL:0000566!1.93e-07!172;CL:0000988!2.28e-07!182 | |ontology_enrichment_celltype=CL:0000542!1.74e-12!53;CL:0000051!1.74e-12!53;CL:0000838!3.39e-12!52;CL:0000084!1.17e-09!25;CL:0000827!1.17e-09!25;CL:0000791!1.62e-07!18;CL:0000789!1.62e-07!18;CL:0002420!1.62e-07!18;CL:0002419!1.62e-07!18;CL:0000790!1.62e-07!18;CL:0000037!1.93e-07!172;CL:0000566!1.93e-07!172;CL:0000988!2.28e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.17e-09;25!CL:0000791;1.54e-07;18!CL:0000789;1.54e-07;18!CL:0002419;1.54e-07;18!CL:0000542;1.69e-07;53 | |ontology_enrichment_celltype_v019=CL:0000084;1.17e-09;25!CL:0000791;1.54e-07;18!CL:0000789;1.54e-07;18!CL:0002419;1.54e-07;18!CL:0000542;1.69e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.74e-12,53;CL:0000051,1.74e-12,53;CL:0000838,3.39e-12,52;CL:0000084,1.17e-09,25;CL:0000827,1.17e-09,25;CL:0000791,1.62e-07,18;CL:0000789,1.62e-07,18;CL:0002420,1.62e-07,18;CL:0002419,1.62e-07,18;CL:0000790,1.62e-07,18;CL:0000037,2.54e-07,168;CL:0000988,4.35e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.54e-07;18!CL:0000051;1.69e-07;53 | |ontology_enrichment_development_v019=CL:0000790;1.54e-07;18!CL:0000051;1.69e-07;53 | ||
|ontology_enrichment_disease=DOID:2531!1.97e-14!51;DOID:0060083!1.97e-14!51;DOID:1240!9.60e-14!39;DOID:8692!1.83e-10!31 | |ontology_enrichment_disease=DOID:2531!1.97e-14!51;DOID:0060083!1.97e-14!51;DOID:1240!9.60e-14!39;DOID:8692!1.83e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.41e-11;39!DOID:8692;3.45e-10;31!DOID:2531;3.16e-09;51!DOID:0060083;3.16e-09;51 | |ontology_enrichment_disease_v019=DOID:1240;3.41e-11;39!DOID:8692;3.45e-10;31!DOID:2531;3.16e-09;51!DOID:0060083;3.16e-09;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.97e-14,51;DOID:0060083,1.97e-14,51;DOID:1240,9.60e-14,39;DOID:8692,1.83e-10,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@UBE2G2 | |short_description=p1@UBE2G2 | ||
}} | }} |
Latest revision as of 19:20, 18 September 2015
Short description: | p1@UBE2G2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2G2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462569, ENST00000490091, ENST00000497664_5end |
EntrezGene: | UBE2G2 |
HGNC: | 12483 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.74e-12 | 53 |
common lymphoid progenitor | 1.74e-12 | 53 |
lymphoid lineage restricted progenitor cell | 3.39e-12 | 52 |
T cell | 1.17e-09 | 25 |
pro-T cell | 1.17e-09 | 25 |
mature alpha-beta T cell | 1.62e-07 | 18 |
alpha-beta T cell | 1.62e-07 | 18 |
immature T cell | 1.62e-07 | 18 |
mature T cell | 1.62e-07 | 18 |
immature alpha-beta T cell | 1.62e-07 | 18 |
hematopoietic stem cell | 2.54e-07 | 168 |
hematopoietic cell | 4.35e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.97e-14 | 51 |
immune system cancer | 1.97e-14 | 51 |
leukemia | 9.60e-14 | 39 |
myeloid leukemia | 1.83e-10 | 31 |