FFCP PHASE1:Hg19::chr12:51818714..51818721,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9498 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11034 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000546497_5end | |||
|cluster_id=chr12:51818714..51818721,+ | |||
|description=CAGE_peak_11_at_SLC4A8_5end | |||
|id=chr12:51818714..51818721,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease=DOID:3095!1.64e-10!22;DOID:2994!1.64e-10!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-40!57;UBERON:0005068!2.12e-40!57;UBERON:0006241!2.12e-40!57;UBERON:0007135!2.12e-40!57;UBERON:0002616!8.26e-36!59;UBERON:0000073!5.01e-35!94;UBERON:0001016!5.01e-35!94;UBERON:0005743!2.09e-32!86;UBERON:0002780!2.89e-32!41;UBERON:0001890!2.89e-32!41;UBERON:0006240!2.89e-32!41;UBERON:0001017!4.56e-32!82;UBERON:0000955!1.40e-31!69;UBERON:0006238!1.40e-31!69;UBERON:0003080!2.23e-31!42;UBERON:0003075!1.81e-30!86;UBERON:0007284!1.81e-30!86;UBERON:0002346!9.19e-29!90;UBERON:0003056!3.82e-24!61;UBERON:0007023!2.16e-21!115;UBERON:0002020!5.35e-20!34;UBERON:0003528!5.35e-20!34;UBERON:0001893!8.60e-20!34;UBERON:0001869!1.21e-18!32;UBERON:0000956!2.85e-18!25;UBERON:0000203!2.85e-18!25;UBERON:0004121!4.06e-18!169;UBERON:0002619!6.16e-18!22;UBERON:0002791!7.71e-18!33;UBERON:0000924!1.71e-17!173;UBERON:0006601!1.71e-17!173;UBERON:0000153!2.14e-17!129;UBERON:0007811!2.14e-17!129;UBERON:0001894!2.75e-17!7;UBERON:0006222!2.75e-17!7;UBERON:0000033!2.87e-17!123;UBERON:0001950!1.78e-16!20;UBERON:0000200!1.56e-13!6;UBERON:0000473!3.98e-11!8;UBERON:0000988!5.23e-11!3;UBERON:0002298!1.96e-10!8;UBERON:0003076!5.26e-10!15;UBERON:0003057!5.26e-10!15;UBERON:0004733!2.06e-09!12;UBERON:0002028!2.06e-09!12;UBERON:0007277!2.06e-09!12;UBERON:0004732!1.23e-08!13;UBERON:0003296!1.47e-08!4;UBERON:0010133!1.47e-08!4;UBERON:0000025!1.83e-08!194;UBERON:0000007!4.30e-08!2;UBERON:0003135!5.64e-08!11;UBERON:0001870!1.01e-07!2;UBERON:0001897!1.19e-07!2;UBERON:0002148!1.19e-07!2;UBERON:0009662!1.19e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;9.48e-20;7!UBERON:0001897;9.86e-18;2!UBERON:0000007;9.86e-18;2!UBERON:0010225;9.86e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000988;2.74e-12;3!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0002784;1.50e-09;4!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0002298;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,8.62e-20,7;UBERON:0006222,8.62e-20,7;UBERON:0001897,7.67e-18,2;UBERON:0010225,7.67e-18,2;UBERON:0000007,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000988,3.24e-12,3;UBERON:0002784,1.32e-09,4;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002298,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.317079050969534,0,0,0,0,0,0,0.336283722218824,1.21393120847326,0.227662191351298,0,0,0,1.01954599465248,0.197318320688547,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.203977659483963,0.801652215796681,4.31906027813771,0,0.833565680400634,2.94760543171796,1.65833887891756,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SLC4A8 | |||
}} |
Latest revision as of 20:21, 18 September 2015
Short description: | p11@SLC4A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC4A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546497_5end |
EntrezGene: | SLC4A8 |
HGNC: | 11034 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
diencephalon | 8.62e-20 | 7 |
future diencephalon | 8.62e-20 | 7 |
dorsal plus ventral thalamus | 7.67e-18 | 2 |
thalamic complex | 7.67e-18 | 2 |
pituitary gland | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
pons | 3.24e-12 | 3 |
regional part of diencephalon | 1.32e-09 | 4 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
brainstem | 9.49e-07 | 6 |