FFCP PHASE1:Hg19::chr10:6622278..6622290,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9410 | |||
|TSSclassifier=strong | |||
|UniProt=Q04759 | |||
|association_with_transcript=-15bp_to_ENST00000263125_5end | |||
|cluster_id=chr10:6622278..6622290,- | |||
|coexpression_cluster_id=C463 | |||
|description=CAGE_peak_6_at_PRKCQ_5end | |||
|id=chr10:6622278..6622290,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.94e-18;3!CL:0002581;1.84e-14;1!CL:1000306;1.84e-14;4!CL:0002547;1.84e-14;4!CL:0000327;1.82e-08;15!CL:0002596;7.03e-08;2!CL:0000077;5.13e-07;19!CL:0000153;9.37e-07;9!CL:0000447;9.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.14e-18,3;CL:1000306,1.85e-14,4;CL:0002547,1.85e-14,4;CL:0002581,2.41e-14,1;CL:0000327,1.69e-08,15;CL:0002596,5.74e-08,2;CL:0000077,4.98e-07,19;CL:0000153,7.87e-07,9;CL:0000447,7.87e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006965;7.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.58e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.61e-07!84;UBERON:0001981!7.52e-07!60;UBERON:0007500!7.52e-07!60;UBERON:0004537!7.52e-07!60;UBERON:0006965!7.52e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.94e-18;3!UBERON:0007616;1.94e-18;3!UBERON:0002217;1.94e-18;3!UBERON:0002018;1.94e-18;3!UBERON:0004797;1.84e-14;4!UBERON:0000415;1.84e-14;4!UBERON:0007240;1.84e-14;4!UBERON:0005742;1.84e-14;4!UBERON:0005734;1.84e-14;4!UBERON:0004664;1.84e-14;4!UBERON:0004663;1.84e-14;4!UBERON:0004573;3.50e-09;33!UBERON:0004571;3.50e-09;33!UBERON:0005406;7.03e-08;2!UBERON:0005396;7.03e-08;2!UBERON:0004905;1.70e-07;8!UBERON:0000982;1.70e-07;8!UBERON:0004770;1.70e-07;8!UBERON:0001637;4.92e-07;42!UBERON:0003509;4.92e-07;42!UBERON:0004572;4.92e-07;42!UBERON:0004457;9.37e-07;9!UBERON:0000042;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.14e-18,3;UBERON:0007616,1.14e-18,3;UBERON:0002217,1.14e-18,3;UBERON:0002018,1.14e-18,3;UBERON:0000415,1.85e-14,4;UBERON:0007240,1.85e-14,4;UBERON:0005742,1.85e-14,4;UBERON:0005734,1.85e-14,4;UBERON:0004664,1.85e-14,4;UBERON:0004663,1.85e-14,4;UBERON:0004573,5.13e-10,33;UBERON:0004571,5.13e-10,33;UBERON:0004797,1.17e-08,7;UBERON:0005396,5.74e-08,2;UBERON:0001637,7.43e-08,42;UBERON:0003509,7.43e-08,42;UBERON:0004572,7.43e-08,42;UBERON:0005406,8.04e-08,2;UBERON:0004905,1.40e-07,8;UBERON:0000982,1.40e-07,8;UBERON:0004770,1.40e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0,0.434473211648397,0,0.670700859703636,0.639312809217652,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,2.29469296599051,2.4826786753885,2.24271040056923,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,3.61727252471503,0,19.7946522540473,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.426910231213777,0,0,0,0,0.460385919864187,0.841980283299221,0.640695746278505,0,0.64341568457443,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,1.90921948755562,0,0,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,1.68886108238131,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.16480387422676,0,1.19548792950642,0.276283915531148,0,0,0,0.311039587661807,0,0,0.511572370226872,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,1.50257608997218,0,0.406870733204662,0,0.429642228169954,0.464033759878494,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0.179088841081487,0,2.63140859494449,0,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.378893491091197,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0.0636471582781649,0,0,0,0.0673520530145875,0.215166616178029,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p6@PRKCQ | |||
}} |
Latest revision as of 21:20, 18 September 2015
Short description: | p6@PRKCQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRKCQ_5end |
Coexpression cluster: | C463_Mesothelial_mesothelioma_Sertoli_mesenchymal_vagina_Cardiac_Fibroblast |
Association with transcript: | -15bp_to_ENST00000263125_5end |
EntrezGene: | PRKCQ |
HGNC: | 9410 |
UniProt: | Q04759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.14e-18 | 3 |
fibroblast of tunica adventitia of artery | 1.85e-14 | 4 |
fibroblast of the aortic adventitia | 1.85e-14 | 4 |
perirenal preadipocyte | 2.41e-14 | 1 |
extracellular matrix secreting cell | 1.69e-08 | 15 |
smooth muscle cell of the carotid artery | 5.74e-08 | 2 |
mesothelial cell | 4.98e-07 | 19 |
GAG secreting cell | 7.87e-07 | 9 |
carbohydrate secreting cell | 7.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.14e-18 | 3 |
layer of synovial tissue | 1.14e-18 | 3 |
synovial joint | 1.14e-18 | 3 |
synovial membrane of synovial joint | 1.14e-18 | 3 |
artery wall | 1.85e-14 | 4 |
tunica adventitia of artery | 1.85e-14 | 4 |
adventitia | 1.85e-14 | 4 |
tunica adventitia of blood vessel | 1.85e-14 | 4 |
aorta tunica adventitia | 1.85e-14 | 4 |
aorta wall | 1.85e-14 | 4 |
systemic artery | 5.13e-10 | 33 |
systemic arterial system | 5.13e-10 | 33 |
blood vessel layer | 1.17e-08 | 7 |
carotid artery segment | 5.74e-08 | 2 |
artery | 7.43e-08 | 42 |
arterial blood vessel | 7.43e-08 | 42 |
arterial system | 7.43e-08 | 42 |
perirenal fat | 8.04e-08 | 2 |
articulation | 1.40e-07 | 8 |
skeletal joint | 1.40e-07 | 8 |
articular system | 1.40e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.58e-08 | 2 |