FFCP PHASE1:Hg19::chr17:18086414..18086434,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54890 | |EntrezGene=54890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25996 | |HGNC=25996 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000541285_5end | |association_with_transcript=22bp_to_ENST00000541285_5end | ||
|cluster_id=chr17:18086414..18086434,+ | |||
|description=CAGE_peak_6_at_ALKBH5_5end | |description=CAGE_peak_6_at_ALKBH5_5end | ||
|id=chr17:18086414..18086434,+ | |id=chr17:18086414..18086434,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.39e-15!45;CL:0002057!4.04e-15!42;CL:0000988!4.14e-12!182;CL:0000063!1.01e-11!578;CL:0000037!2.52e-11!172;CL:0000566!2.52e-11!172;CL:0002032!1.51e-10!165;CL:0000837!1.51e-10!165;CL:0000012!2.31e-10!682;CL:0002031!3.01e-10!124;CL:0002087!7.75e-10!119;CL:0000557!8.28e-10!71;CL:0002009!1.45e-09!65;CL:0000548!1.60e-09!679;CL:0000004!1.60e-09!679;CL:0000255!1.60e-09!679;CL:0000738!6.38e-09!140;CL:0000763!7.04e-09!112;CL:0000049!7.04e-09!112;CL:0000839!9.99e-09!70;CL:0002194!1.07e-08!63;CL:0000576!1.07e-08!63;CL:0000040!1.07e-08!63;CL:0000559!1.07e-08!63;CL:0000766!9.41e-07!76 | |ontology_enrichment_celltype=CL:0000860!1.39e-15!45;CL:0002057!4.04e-15!42;CL:0000988!4.14e-12!182;CL:0000063!1.01e-11!578;CL:0000037!2.52e-11!172;CL:0000566!2.52e-11!172;CL:0002032!1.51e-10!165;CL:0000837!1.51e-10!165;CL:0000012!2.31e-10!682;CL:0002031!3.01e-10!124;CL:0002087!7.75e-10!119;CL:0000557!8.28e-10!71;CL:0002009!1.45e-09!65;CL:0000548!1.60e-09!679;CL:0000004!1.60e-09!679;CL:0000255!1.60e-09!679;CL:0000738!6.38e-09!140;CL:0000763!7.04e-09!112;CL:0000049!7.04e-09!112;CL:0000839!9.99e-09!70;CL:0002194!1.07e-08!63;CL:0000576!1.07e-08!63;CL:0000040!1.07e-08!63;CL:0000559!1.07e-08!63;CL:0000766!9.41e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-12;33!CL:0002057;2.23e-12;33!CL:0000473;6.85e-09;39!CL:0000234;6.85e-09;39!CL:0000576;2.31e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.05e-18,42;CL:0002057,7.05e-18,42;CL:0000473,1.82e-15,48;CL:0000234,1.82e-15,48;CL:0000037,4.72e-14,168;CL:0000988,5.34e-14,177;CL:0002032,4.92e-13,161;CL:0000837,4.92e-13,161;CL:0002031,7.45e-13,120;CL:0002087,1.33e-12,115;CL:0000557,1.64e-12,67;CL:0000738,1.94e-12,136;CL:0002009,4.81e-12,61;CL:0002194,6.95e-11,59;CL:0000576,6.95e-11,59;CL:0000040,6.95e-11,59;CL:0000559,6.95e-11,59;CL:0000839,1.18e-10,66;CL:0000763,1.26e-10,108;CL:0000049,1.26e-10,108;CL:0000766,1.86e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-13;42 | |||
|ontology_enrichment_disease=DOID:162!1.28e-19!235;DOID:14566!8.08e-19!239;DOID:0050686!9.64e-13!137;DOID:0050687!4.36e-11!143;DOID:305!7.92e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.77e-16,235;DOID:14566,3.65e-15,239;DOID:0050686,2.60e-11,137;DOID:0050687,1.62e-09,143;DOID:305,2.61e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-09!80;UBERON:0001474!8.36e-09!86;UBERON:0004765!6.27e-07!101;UBERON:0001434!6.27e-07!101;UBERON:0002390!6.40e-07!102;UBERON:0003061!6.40e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.79e-12,76;UBERON:0001474,8.16e-12,82;UBERON:0002390,8.14e-10,98;UBERON:0003061,8.14e-10,98;UBERON:0004765,8.44e-10,90;UBERON:0002405,1.90e-09,93;UBERON:0002193,8.17e-08,108;UBERON:0001434,3.34e-07,100 | |||
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| ||
|short_description=p6@ALKBH5 | |short_description=p6@ALKBH5 | ||
}} | }} |
Latest revision as of 22:37, 18 September 2015
Short description: | p6@ALKBH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALKBH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000541285_5end |
EntrezGene: | ALKBH5 |
HGNC: | 25996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.05e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.05e-18 | 42 |
defensive cell | 1.82e-15 | 48 |
phagocyte | 1.82e-15 | 48 |
hematopoietic stem cell | 4.72e-14 | 168 |
hematopoietic cell | 5.34e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.92e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.92e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 7.45e-13 | 120 |
nongranular leukocyte | 1.33e-12 | 115 |
granulocyte monocyte progenitor cell | 1.64e-12 | 67 |
leukocyte | 1.94e-12 | 136 |
macrophage dendritic cell progenitor | 4.81e-12 | 61 |
monopoietic cell | 6.95e-11 | 59 |
monocyte | 6.95e-11 | 59 |
monoblast | 6.95e-11 | 59 |
promonocyte | 6.95e-11 | 59 |
myeloid lineage restricted progenitor cell | 1.18e-10 | 66 |
myeloid cell | 1.26e-10 | 108 |
common myeloid progenitor | 1.26e-10 | 108 |
myeloid leukocyte | 1.86e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.79e-12 | 76 |
bone element | 8.16e-12 | 82 |
hematopoietic system | 8.14e-10 | 98 |
blood island | 8.14e-10 | 98 |
skeletal element | 8.44e-10 | 90 |
immune system | 1.90e-09 | 93 |
hemolymphoid system | 8.17e-08 | 108 |
skeletal system | 3.34e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.77e-16 | 235 |
disease of cellular proliferation | 3.65e-15 | 239 |
organ system cancer | 2.60e-11 | 137 |
cell type cancer | 1.62e-09 | 143 |
carcinoma | 2.61e-09 | 106 |