FFCP PHASE1:Hg19::chr21:47518016..47518071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt=P12110,Q9BUM6 | |UniProt=P12110,Q9BUM6 | ||
|association_with_transcript=0bp_to_ENST00000310645,ENST00000357838,NM_001849,NM_058174,NM_058175,uc002zhy.1,uc002zhz.1,uc002zia.1,uc002zib.1_5end | |association_with_transcript=0bp_to_ENST00000310645,ENST00000357838,NM_001849,NM_058174,NM_058175,uc002zhy.1,uc002zhz.1,uc002zia.1,uc002zib.1_5end | ||
|cluster_id=chr21:47518016..47518071,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_1_at_COL6A2_5end | |description=CAGE_peak_1_at_COL6A2_5end | ||
|id=chr21:47518016..47518071,+ | |id=chr21:47518016..47518071,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.42e-47!180;CL:0000057!2.89e-25!75;CL:0000183!8.96e-19!59;CL:0000680!1.08e-18!57;CL:0000056!1.08e-18!57;CL:0000355!1.08e-18!57;CL:0000187!2.45e-18!54;CL:0000393!2.32e-17!60;CL:0000211!2.32e-17!60;CL:0000192!1.97e-13!42;CL:0000514!1.97e-13!42;CL:0002620!5.38e-11!23;CL:0000359!2.30e-10!32;CL:0000222!1.16e-08!119;CL:0000499!2.43e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.42e-47!180;CL:0000057!2.89e-25!75;CL:0000183!8.96e-19!59;CL:0000680!1.08e-18!57;CL:0000056!1.08e-18!57;CL:0000355!1.08e-18!57;CL:0000187!2.45e-18!54;CL:0000393!2.32e-17!60;CL:0000211!2.32e-17!60;CL:0000192!1.97e-13!42;CL:0000514!1.97e-13!42;CL:0002620!5.38e-11!23;CL:0000359!2.30e-10!32;CL:0000222!1.16e-08!119;CL:0000499!2.43e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.68e-11;23!CL:0000187;6.54e-11;55!CL:0000057;1.20e-10;73!CL:0000192;3.08e-10;43!CL:0000359;6.96e-10;32!CL:0000393;9.33e-10;61!CL:0000211;9.33e-10;61!CL:0000134;3.53e-09;55!CL:0000723;5.77e-09;61!CL:0002320;8.67e-09;188!CL:0000048;2.69e-08;58!CL:0000499;6.61e-08;28!CL:0000034;5.69e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.17e-26,76;CL:0000680,2.78e-19,58;CL:0000056,2.78e-19,58;CL:0000355,2.78e-19,58;CL:0000187,6.31e-19,55;CL:0000393,6.24e-18,61;CL:0000211,6.24e-18,61;CL:0000192,5.68e-14,43;CL:0000514,5.68e-14,43;CL:0002620,4.69e-11,23;CL:0000359,2.03e-10,32;CL:0000222,9.51e-09,121;CL:0000499,6.64e-08,28;CL:0000048,1.18e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000355;1.43e-10;58!CL:0000514;3.08e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.37e-25!83;UBERON:0002329!3.37e-25!83;UBERON:0003077!3.37e-25!83;UBERON:0003059!3.37e-25!83;UBERON:0007282!3.37e-25!83;UBERON:0009618!3.37e-25!83;UBERON:0007285!3.37e-25!83;UBERON:0004290!9.08e-24!70;UBERON:0005256!5.91e-21!143;UBERON:0002385!8.31e-20!63;UBERON:0001015!8.31e-20!63;UBERON:0000383!8.31e-20!63;UBERON:0000486!1.05e-19!82;UBERON:0001134!1.53e-19!61;UBERON:0002036!1.53e-19!61;UBERON:0003082!1.53e-19!61;UBERON:0000475!1.14e-15!365;UBERON:0002100!8.68e-14!216;UBERON:0000481!3.26e-11!347;UBERON:0003102!3.47e-11!95;UBERON:0002199!1.16e-10!45;UBERON:0002416!1.16e-10!45;UBERON:0003104!3.50e-10!238;UBERON:0009142!3.50e-10!238;UBERON:0001013!2.10e-08!14;UBERON:0002097!2.15e-08!40;UBERON:0000468!3.46e-08!659;UBERON:0004872!7.38e-08!84;UBERON:0007100!7.58e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.77e-10;31!UBERON:0001015;1.77e-10;31!UBERON:0000383;1.77e-10;31!UBERON:0002384;4.61e-09;198!UBERON:0001013;1.90e-08;14!UBERON:0002204;7.35e-08;70!UBERON:0002199;4.05e-07;46!UBERON:0002416;4.05e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.99e-24,73;UBERON:0002329,2.09e-24,71;UBERON:0003059,2.09e-24,71;UBERON:0007282,2.09e-24,71;UBERON:0004290,2.09e-24,71;UBERON:0009618,2.09e-24,71;UBERON:0003077,6.13e-24,72;UBERON:0007285,6.13e-24,72;UBERON:0007503,5.49e-23,78;UBERON:0003104,1.66e-21,160;UBERON:0009142,1.66e-21,160;UBERON:0002385,2.10e-20,64;UBERON:0001015,2.10e-20,64;UBERON:0000383,2.10e-20,64;UBERON:0001134,3.87e-20,62;UBERON:0002036,3.87e-20,62;UBERON:0003082,3.87e-20,62;UBERON:0000486,3.93e-20,83;UBERON:0005256,1.11e-19,122;UBERON:0002100,1.21e-11,199;UBERON:0002199,7.02e-11,46;UBERON:0002416,7.02e-11,46;UBERON:0003102,1.66e-10,99;UBERON:0000490,3.13e-09,148;UBERON:0002097,1.34e-08,41;UBERON:0001013,1.90e-08,14;UBERON:0004872,1.58e-07,83;UBERON:0007100,7.02e-07,27;UBERON:0000926,7.61e-07,315;UBERON:0004120,7.61e-07,315;UBERON:0006603,7.61e-07,315 | |||
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| ||
|short_description=p1@COL6A2 | |short_description=p1@COL6A2 | ||
}} | }} |
Latest revision as of 22:44, 18 September 2015
Short description: | p1@COL6A2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 0bp_to_ENST00000310645, ENST00000357838, NM_001849, NM_058174, NM_058175, uc002zhy.1, uc002zhz.1, uc002zia.1, uc002zib.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | P12110Q9BUM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data