FFCP PHASE1:Hg19::chr3:52233373..52233385,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:52233373..52233385,+ to FFCP PHASE1:Hg19::chr3:52233373..52233385,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=211 | |EntrezGene=211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=396 | |HGNC=396 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_CU680058,JF432123_5end | |||
|cluster_id=chr3:52233373..52233385,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_6_at_ALAS1_5end | |||
|id=chr3:52233373..52233385,+ | |||
|ontology_enrichment_celltype=CL:0000839!3.17e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.61e-14;5!CL:0000163;1.77e-08;9!CL:0000775;6.50e-07;3!CL:0002541;8.62e-07;3!CL:0002615;8.62e-07;3!CL:0000346;8.62e-07;3!CL:1000428;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.61e-14,5;CL:0002028,1.61e-14,5;CL:0000766,8.97e-11,72;CL:0000839,9.93e-09,66;CL:0000557,1.35e-08,67;CL:0000163,1.77e-08,9;CL:0000763,4.60e-07,108;CL:0000049,4.60e-07,108;CL:0000775,6.50e-07,3;CL:0000346,7.28e-07,3;CL:1000428,7.28e-07,3;CL:0002541,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.62e-07;3!UBERON:0003124;8.62e-07;3!UBERON:0000920;8.62e-07;3!UBERON:0001992;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-07,76;UBERON:0001474,5.38e-07,82;UBERON:0000412,7.28e-07,3;UBERON:0001992,7.28e-07,3;UBERON:0000920,8.15e-07,3 | |||
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| ||
|short_description=p6@ALAS1 | |||
}} | }} |
Latest revision as of 22:48, 18 September 2015
Short description: | p6@ALAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALAS1_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 116bp_to_CU680058, JF432123_5end |
EntrezGene: | ALAS1 |
HGNC: | 396 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.61e-14 | 5 |
basophil mast progenitor cell | 1.61e-14 | 5 |
myeloid leukocyte | 8.97e-11 | 72 |
myeloid lineage restricted progenitor cell | 9.93e-09 | 66 |
granulocyte monocyte progenitor cell | 1.35e-08 | 67 |
endocrine cell | 1.77e-08 | 9 |
myeloid cell | 4.60e-07 | 108 |
common myeloid progenitor | 4.60e-07 | 108 |
neutrophil | 6.50e-07 | 3 |
hair follicle dermal papilla cell | 7.28e-07 | 3 |
stem cell of epidermis | 7.28e-07 | 3 |
chorionic membrane mesenchymal stem cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.46e-07 | 76 |
bone element | 5.38e-07 | 82 |
dermal papilla | 7.28e-07 | 3 |
papillary layer of dermis | 7.28e-07 | 3 |
egg chorion | 8.15e-07 | 3 |