FFCP PHASE1:Hg19::chr3:52279908..52279919,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:52279908..52279919,+
|short_description=p3@PPM1M
|description=CAGE_peak_3_at_PPM1M_5end
|association_with_transcript=0bp_to_ENST00000467471_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132160 | |EntrezGene=132160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26506 | |HGNC=26506 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467471_5end | |||
|cluster_id=chr3:52279908..52279919,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_PPM1M_5end | |||
|id=chr3:52279908..52279919,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.77e-30!140;CL:0002087!7.31e-27!119;CL:0000037!1.14e-26!172;CL:0000566!1.14e-26!172;CL:0002031!1.14e-25!124;CL:0002032!4.45e-25!165;CL:0000837!4.45e-25!165;CL:0000988!5.16e-25!182;CL:0000766!6.22e-20!76;CL:0000791!7.62e-19!18;CL:0000789!7.62e-19!18;CL:0002420!7.62e-19!18;CL:0002419!7.62e-19!18;CL:0000790!7.62e-19!18;CL:0000084!3.96e-17!25;CL:0000827!3.96e-17!25;CL:0000557!3.01e-16!71;CL:0000860!1.14e-15!45;CL:0000839!1.46e-15!70;CL:0002057!1.52e-15!42;CL:0002194!2.00e-14!63;CL:0000576!2.00e-14!63;CL:0000040!2.00e-14!63;CL:0000559!2.00e-14!63;CL:0000763!2.58e-14!112;CL:0000049!2.58e-14!112;CL:0002009!1.39e-13!65;CL:0000625!6.19e-13!11;CL:0000838!5.04e-11!52;CL:0000542!1.27e-10!53;CL:0000051!1.27e-10!53;CL:0000134!1.97e-07!358;CL:0000624!2.61e-07!6;CL:0002320!4.17e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.23e-39;18!CL:0000789;2.23e-39;18!CL:0002419;2.23e-39;18!CL:0000084;5.32e-31;25!CL:0000625;2.94e-30;11!CL:0000624;2.02e-13;6!CL:0000542;1.84e-09;53!CL:0000860;1.40e-08;33!CL:0002057;1.40e-08;33!CL:0000473;1.46e-07;39!CL:0000234;1.46e-07;39!CL:0000094;5.15e-07;8!CL:0000738;5.16e-07;136!CL:0002087;6.67e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-39,18;CL:0000789,1.56e-39,18;CL:0002420,1.56e-39,18;CL:0002419,1.56e-39,18;CL:0000790,1.56e-39,18;CL:0000084,5.43e-31,25;CL:0000827,5.43e-31,25;CL:0000625,3.29e-30,11;CL:0000738,2.34e-25,136;CL:0002087,1.90e-22,115;CL:0000037,5.06e-20,168;CL:0002031,1.23e-19,120;CL:0000838,1.07e-18,52;CL:0002032,1.24e-18,161;CL:0000837,1.24e-18,161;CL:0000988,1.59e-18,177;CL:0000542,2.98e-18,53;CL:0000051,2.98e-18,53;CL:0000624,1.29e-13,6;CL:0000766,1.24e-08,72;CL:0000860,2.91e-08,42;CL:0002057,2.91e-08,42;CL:0000473,3.22e-08,48;CL:0000234,3.22e-08,48;CL:0000094,4.34e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-39;18!CL:0000051;1.84e-09;53!CL:0002057;3.57e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.53e-26!102;UBERON:0003061!7.53e-26!102;UBERON:0002193!1.76e-23!112;UBERON:0002371!1.98e-14!80;UBERON:0001474!5.40e-13!86;UBERON:0000178!5.50e-12!15;UBERON:0000179!5.50e-12!15;UBERON:0000463!5.50e-12!15;UBERON:0002405!3.94e-11!115;UBERON:0004765!3.73e-10!101;UBERON:0001434!3.73e-10!101;UBERON:0003081!6.77e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.04e-10;15!UBERON:0000179;8.04e-10;15!UBERON:0000463;8.04e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.87e-10,98;UBERON:0003061,3.87e-10,98;UBERON:0000178,7.11e-10,15;UBERON:0000179,7.11e-10,15;UBERON:0000463,7.11e-10,15;UBERON:0002193,9.59e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0,0,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,0.647787332037959,0,2.76256653681173,0.377875943688809,2.18325655069035,1.16214518452842,0.822335776043652,0.929119112685311,1.1507695692886,0.256160706529101,0.236482229888585,0,0,1.35426486594342,2.07066573496865,2.18324920046277,1.12361742222542,0.306083892370903,0.962787081228281,0.639337125799041,1.64925650093358,0.199463657621632,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0.211255286311942,0.425208599930087,0.628975936525128,1.12328631146495,0.901061357049038,0,0,0.19891667719909,0.365328307529268,0,0,0,0.853460445133014,0,0,0.661044872784862,1.90810750907073,0,0,0.382273228125229,0,0,0,1.37696839079683,1.17903228824749,2.67281948699362,2.00623794468814,0.977766799900771,0,0,2.33961959458865,1.47302953737419,1.77227115666897,1.62482318259009,3.5865569523189,2.73124629875744,2.13769275984779,2.48715016007264,1.15921234294021,1.92772532110679,2.94294910898684,1.04535523804977,5.21222976408804,2.68254345521345,2.40539211837841,2.53019692019503,4.77848121486145,2.60433381542567,0.950452044448374,2.25862678616659,3.19966527886046,3.74792179657038,2.60454977248419,4.10563998460523,2.01606743224732,2.13952156626806,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0.616339038092582,0.829312462163088,0.720599767084807,0.6312121671319,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,2.37190332345469,2.18183161675572,0,0,0,0,0,2.99602809578873,0,3.31532410748828,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,1.94142780736755,0.640365346820666,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,2.29391162142713,1.13929437434833,1.66762242820452,0.822724546172388,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0.446342914883745,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0.516644938982447,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,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| ||
|short_description=p3@PPM1M | |||
}} | }} |
Latest revision as of 23:02, 18 September 2015
Short description: | p3@PPM1M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPM1M_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000467471_5end |
EntrezGene: | PPM1M |
HGNC: | 26506 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.56e-39 | 18 |
alpha-beta T cell | 1.56e-39 | 18 |
immature T cell | 1.56e-39 | 18 |
mature T cell | 1.56e-39 | 18 |
immature alpha-beta T cell | 1.56e-39 | 18 |
T cell | 5.43e-31 | 25 |
pro-T cell | 5.43e-31 | 25 |
CD8-positive, alpha-beta T cell | 3.29e-30 | 11 |
leukocyte | 2.34e-25 | 136 |
nongranular leukocyte | 1.90e-22 | 115 |
hematopoietic stem cell | 5.06e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 1.23e-19 | 120 |
lymphoid lineage restricted progenitor cell | 1.07e-18 | 52 |
hematopoietic oligopotent progenitor cell | 1.24e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-18 | 161 |
hematopoietic cell | 1.59e-18 | 177 |
lymphocyte | 2.98e-18 | 53 |
common lymphoid progenitor | 2.98e-18 | 53 |
CD4-positive, alpha-beta T cell | 1.29e-13 | 6 |
myeloid leukocyte | 1.24e-08 | 72 |
classical monocyte | 2.91e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.91e-08 | 42 |
defensive cell | 3.22e-08 | 48 |
phagocyte | 3.22e-08 | 48 |
granulocyte | 4.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.87e-10 | 98 |
blood island | 3.87e-10 | 98 |
blood | 7.11e-10 | 15 |
haemolymphatic fluid | 7.11e-10 | 15 |
organism substance | 7.11e-10 | 15 |
hemolymphoid system | 9.59e-09 | 108 |