FFCP PHASE1:Hg19::chr6:44144336..44144350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11131 | |EntrezGene=11131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1478 | |HGNC=1478 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000533604_5end | |association_with_transcript=-2bp_to_ENST00000533604_5end | ||
|cluster_id=chr6:44144336..44144350,+ | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_2_at_CAPN11_5end | |description=CAGE_peak_2_at_CAPN11_5end | ||
|id=chr6:44144336..44144350,+ | |id=chr6:44144336..44144350,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.03e-19!35;CL:0002139!3.27e-17!24;CL:0000071!1.09e-15!18;CL:0002546!1.09e-15!18;CL:0002078!2.28e-14!44;CL:1000413!2.68e-13!9;CL:0000213!6.25e-12!57;CL:0000215!6.25e-12!57;CL:0002544!1.80e-08!6;CL:0002543!6.09e-08!6 | |ontology_enrichment_celltype=CL:0000115!1.03e-19!35;CL:0002139!3.27e-17!24;CL:0000071!1.09e-15!18;CL:0002546!1.09e-15!18;CL:0002078!2.28e-14!44;CL:1000413!2.68e-13!9;CL:0000213!6.25e-12!57;CL:0000215!6.25e-12!57;CL:0002544!1.80e-08!6;CL:0002543!6.09e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002262;2.73e-20;2!CL:1000398;2.73e-20;2!CL:0000115;3.57e-18;36!CL:0002078;2.31e-10;45!CL:0002139;8.98e-10;24!CL:0000071;1.15e-08;18!CL:0002188;1.79e-08;5!CL:0002544;2.57e-07;6!CL:0002543;3.35e-07;6!CL:0000136;4.51e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.05e-20,2;CL:1000398,2.05e-20,2;CL:0000115,2.63e-20,36;CL:0002078,5.24e-16,45;CL:0000213,3.80e-12,58;CL:0000215,3.80e-12,58;CL:0002139,7.95e-10,24;CL:0000071,9.31e-09,18;CL:0002546,9.31e-09,18;CL:0002188,1.18e-08,5;CL:0002544,2.02e-07,6;CL:0002543,3.05e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.94e-11;1!UBERON:0006298;9.04e-11;1!CL:0002546;1.15e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.63e-16!115;UBERON:0001986!1.09e-15!18;UBERON:0004638!1.09e-15!18;UBERON:0004852!1.09e-15!18;UBERON:0003915!2.68e-13!9;UBERON:0004700!2.68e-13!9;UBERON:0001917!2.68e-13!9;UBERON:0000487!3.47e-12!22;UBERON:0006914!2.62e-10!25;UBERON:0000055!5.56e-08!69;UBERON:0004872!2.21e-07!84;UBERON:0001638!2.57e-07!9;UBERON:0003920!2.57e-07!9;UBERON:0004582!2.57e-07!9;UBERON:0002049!5.26e-07!79;UBERON:0007798!5.26e-07!79;UBERON:0001981!5.59e-07!60;UBERON:0007500!5.59e-07!60;UBERON:0004537!5.59e-07!60;UBERON:0006965!5.59e-07!60 | |ontology_enrichment_uberon=UBERON:0007023!3.63e-16!115;UBERON:0001986!1.09e-15!18;UBERON:0004638!1.09e-15!18;UBERON:0004852!1.09e-15!18;UBERON:0003915!2.68e-13!9;UBERON:0004700!2.68e-13!9;UBERON:0001917!2.68e-13!9;UBERON:0000487!3.47e-12!22;UBERON:0006914!2.62e-10!25;UBERON:0000055!5.56e-08!69;UBERON:0004872!2.21e-07!84;UBERON:0001638!2.57e-07!9;UBERON:0003920!2.57e-07!9;UBERON:0004582!2.57e-07!9;UBERON:0002049!5.26e-07!79;UBERON:0007798!5.26e-07!79;UBERON:0001981!5.59e-07!60;UBERON:0007500!5.59e-07!60;UBERON:0004537!5.59e-07!60;UBERON:0006965!5.59e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.73e-20;2!UBERON:0003497;2.73e-20;2!UBERON:0003909;2.73e-20;2!UBERON:0003835;2.73e-20;2!UBERON:0001280;7.41e-14;3!UBERON:0004647;7.41e-14;3!UBERON:0002079;3.94e-11;1!UBERON:0001736;9.04e-11;1!UBERON:0000996;9.04e-11;1!UBERON:0000353;2.11e-10;15!UBERON:0001638;5.36e-10;9!UBERON:0003920;5.36e-10;9!UBERON:0004582;5.36e-10;9!UBERON:0004638;1.15e-08;18!UBERON:0001986;1.15e-08;18!UBERON:0004852;1.15e-08;18!UBERON:0000487;4.08e-07;22!UBERON:0000055;4.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.05e-20,2;UBERON:0003497,2.05e-20,2;UBERON:0003909,2.05e-20,2;UBERON:0003835,2.05e-20,2;UBERON:0001280,6.12e-14,3;UBERON:0004647,6.12e-14,3;UBERON:0005171,6.12e-14,3;UBERON:0002079,4.15e-11,1;UBERON:0001736,7.46e-11,1;UBERON:0006298,7.46e-11,1;UBERON:0000996,8.22e-11,1;UBERON:0000353,1.50e-10,15;UBERON:0001638,5.89e-10,9;UBERON:0003920,5.89e-10,9;UBERON:0004582,5.89e-10,9;UBERON:0004638,9.31e-09,18;UBERON:0001986,9.31e-09,18;UBERON:0004852,9.31e-09,18;UBERON:0000058,2.31e-08,19;UBERON:0000055,5.54e-08,68;UBERON:0002394,2.09e-07,6;UBERON:0003928,2.09e-07,6;UBERON:0007500,3.12e-07,59;UBERON:0001981,3.12e-07,59;UBERON:0004537,3.12e-07,59;UBERON:0006965,3.12e-07,59;UBERON:0000487,3.44e-07,22;UBERON:0002049,7.84e-07,78;UBERON:0007798,7.84e-07,78 | |||
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| ||
|short_description=p2@CAPN11 | |short_description=p2@CAPN11 | ||
}} | }} |
Latest revision as of 23:40, 18 September 2015
Short description: | p2@CAPN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPN11_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -2bp_to_ENST00000533604_5end |
EntrezGene: | CAPN11 |
HGNC: | 1478 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.05e-20 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-20 | 2 |
endothelial cell | 2.63e-20 | 36 |
meso-epithelial cell | 5.24e-16 | 45 |
lining cell | 3.80e-12 | 58 |
barrier cell | 3.80e-12 | 58 |
endothelial cell of vascular tree | 7.95e-10 | 24 |
blood vessel endothelial cell | 9.31e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.31e-09 | 18 |
glomerular endothelial cell | 1.18e-08 | 5 |
aortic endothelial cell | 2.02e-07 | 6 |
vein endothelial cell | 3.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.05e-20 | 2 |
abdomen blood vessel | 2.05e-20 | 2 |
sinusoid | 2.05e-20 | 2 |
abdominal segment blood vessel | 2.05e-20 | 2 |
liver parenchyma | 6.12e-14 | 3 |
liver lobule | 6.12e-14 | 3 |
hepatic duct | 6.12e-14 | 3 |
left cardiac atrium | 4.15e-11 | 1 |
submandibular gland | 7.46e-11 | 1 |
submandibular gland primordium | 7.46e-11 | 1 |
vagina | 8.22e-11 | 1 |
parenchyma | 1.50e-10 | 15 |
vein | 5.89e-10 | 9 |
venous blood vessel | 5.89e-10 | 9 |
venous system | 5.89e-10 | 9 |
blood vessel endothelium | 9.31e-09 | 18 |
endothelium | 9.31e-09 | 18 |
cardiovascular system endothelium | 9.31e-09 | 18 |
duct | 2.31e-08 | 19 |
vessel | 5.54e-08 | 68 |
bile duct | 2.09e-07 | 6 |
digestive system duct | 2.09e-07 | 6 |
epithelial tube open at both ends | 3.12e-07 | 59 |
blood vessel | 3.12e-07 | 59 |
blood vasculature | 3.12e-07 | 59 |
vascular cord | 3.12e-07 | 59 |
simple squamous epithelium | 3.44e-07 | 22 |
vasculature | 7.84e-07 | 78 |
vascular system | 7.84e-07 | 78 |