FFCP PHASE1:Hg19::chr3:52444749..52444760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51533 | |EntrezGene=51533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18458 | |HGNC=18458 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWX1 | |UniProt=Q9BWX1 | ||
|association_with_transcript=76bp_to_ENST00000327906_5end | |association_with_transcript=76bp_to_ENST00000327906_5end | ||
|cluster_id=chr3:52444749..52444760,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_PHF7_5end | |description=CAGE_peak_4_at_PHF7_5end | ||
|id=chr3:52444749..52444760,+ | |id=chr3:52444749..52444760,+ | ||
|ontology_enrichment_celltype=CL:0000988!9.12e-15!182;CL:0002032!2.84e-14!165;CL:0000837!2.84e-14!165;CL:0000037!4.10e-14!172;CL:0000566!4.10e-14!172;CL:0000542!4.24e-12!53;CL:0000051!4.24e-12!53;CL:0000838!1.24e-11!52;CL:0002031!4.47e-08!124;CL:0000738!1.44e-07!140;CL:0002087!2.82e-07!119 | |ontology_enrichment_celltype=CL:0000988!9.12e-15!182;CL:0002032!2.84e-14!165;CL:0000837!2.84e-14!165;CL:0000037!4.10e-14!172;CL:0000566!4.10e-14!172;CL:0000542!4.24e-12!53;CL:0000051!4.24e-12!53;CL:0000838!1.24e-11!52;CL:0002031!4.47e-08!124;CL:0000738!1.44e-07!140;CL:0002087!2.82e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.86e-14;6!CL:0000084;1.31e-12;25!CL:0000791;2.74e-08;18!CL:0000789;2.74e-08;18!CL:0002419;2.74e-08;18!CL:0000542;1.85e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.00e-14,6;CL:0000084,1.30e-12,25;CL:0000827,1.30e-12,25;CL:0000988,2.17e-10,177;CL:0000838,4.08e-10,52;CL:0002032,4.16e-10,161;CL:0000837,4.16e-10,161;CL:0000542,6.61e-10,53;CL:0000051,6.61e-10,53;CL:0000037,1.39e-09,168;CL:0000791,2.62e-08,18;CL:0000789,2.62e-08,18;CL:0002420,2.62e-08,18;CL:0002419,2.62e-08,18;CL:0000790,2.62e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.74e-08;18!CL:0000051;1.85e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!2.60e-16!51;DOID:0060083!2.60e-16!51;DOID:1240!8.45e-14!39;DOID:0050686!1.81e-10!137;DOID:162!2.72e-10!235;DOID:14566!4.28e-10!239;DOID:8692!1.23e-09!31 | |ontology_enrichment_disease=DOID:2531!2.60e-16!51;DOID:0060083!2.60e-16!51;DOID:1240!8.45e-14!39;DOID:0050686!1.81e-10!137;DOID:162!2.72e-10!235;DOID:14566!4.28e-10!239;DOID:8692!1.23e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:9119;2.38e-10;1!DOID:1240;3.48e-08;39!DOID:8692;3.06e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.66e-11,39;DOID:9119,2.08e-10,1;DOID:2531,4.86e-08,51;DOID:0060083,4.86e-08,51;DOID:8692,2.73e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0,0,0.383829398097213,0,0.919421224478927,0,0,0.697204805222715,0.284338464974843,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,1.57204305099666,2.05601498999509,0,0.977766799900771,0.473447805734733,0,0.111410456885174,1.47302953737419,0.221533894583621,0.812411591295047,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0.795285947051099,0,0,0,0,4.32230949142452,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.672510863961164,0.197030760201927,1.50939302401662,0.513372145118994,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,2.73881614839831,0.313359791546046,0,0,0.642352300414798,0.605399121573143,2.55507742614196,1.71752672377882,0.307240764308458,0,0,0.19538809540204,0.835218521685727,1.23087398947712,0,1.33228787199128,0,0.18714054040822,0,0,1.5602073798847,0,0,0,0.307160702099232,0,0,0.667852230137435,0,1.05562704063997,0,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.179736702294654,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0.32681539055697,0.83654246567162,0,0.113942055847001,0.23056390438806,0,0,0.638002319463839,0,0,1.02193298195737,0.470940769185074,0.664846727600626,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0,0,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0.39961921916426,0.432271251462318,0,0.343189995723929,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0.0787831823072236,0,0,0.0984274815147488,0.254019996197353,0,0,0.160753148465019,0,0,0,1.5476039091159,0,0,0,0,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.82092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.422624246717254,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0,0,0.212574920101683,0,0,0,0.394308725006267,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0.171488009437418,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0.17071847709395,0,0,0.354996002191696,0,0,0.22910686854405,0,0,0.111855431797792,0.588901401691458,0,0.647428837187895,0,0,0,0,0.596852325484105,0.356760272332706,0,0,0.150962843566674,0.540219106755613,0,0,0,0,0,0,0.4226557275834,0,0,0,0.199882311849858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| ||
|short_description=p4@PHF7 | |short_description=p4@PHF7 | ||
}} | }} |
Latest revision as of 23:43, 18 September 2015
Short description: | p4@PHF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHF7_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 76bp_to_ENST00000327906_5end |
EntrezGene: | PHF7 |
HGNC: | 18458 |
UniProt: | Q9BWX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.00e-14 | 6 |
T cell | 1.30e-12 | 25 |
pro-T cell | 1.30e-12 | 25 |
hematopoietic cell | 2.17e-10 | 177 |
lymphoid lineage restricted progenitor cell | 4.08e-10 | 52 |
hematopoietic oligopotent progenitor cell | 4.16e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.16e-10 | 161 |
lymphocyte | 6.61e-10 | 53 |
common lymphoid progenitor | 6.61e-10 | 53 |
hematopoietic stem cell | 1.39e-09 | 168 |
mature alpha-beta T cell | 2.62e-08 | 18 |
alpha-beta T cell | 2.62e-08 | 18 |
immature T cell | 2.62e-08 | 18 |
mature T cell | 2.62e-08 | 18 |
immature alpha-beta T cell | 2.62e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.66e-11 | 39 |
acute myeloid leukemia | 2.08e-10 | 1 |
hematologic cancer | 4.86e-08 | 51 |
immune system cancer | 4.86e-08 | 51 |
myeloid leukemia | 2.73e-07 | 31 |