FFCP PHASE1:Hg19::chr7:5463396..5463443,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11962 | |||
|TSSclassifier=strong | |||
|UniProt=B5ME58,C9JS29,O15417,A3KMH2 | |||
|association_with_transcript=-219bp_to_ENST00000327499,ENST00000399537,ENST00000399544,ENST00000430969,NM_001080495,uc003soi.3_5end | |||
|cluster_id=chr7:5463396..5463443,- | |||
|description=CAGE_peak_1_at_TNRC18_5end | |||
|id=chr7:5463396..5463443,- | |||
|ontology_enrichment_celltype=CL:0000057!4.62e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.46e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.76e-15!659;UBERON:0000467!1.30e-11!625;UBERON:0000480!2.14e-11!626;UBERON:0002050!3.27e-09!605;UBERON:0005423!3.27e-09!605;UBERON:0000923!5.96e-09!604;UBERON:0005291!5.96e-09!604;UBERON:0006598!5.96e-09!604;UBERON:0002532!5.96e-09!604;UBERON:0000922!1.09e-08!612;UBERON:0000062!8.49e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000923,1.95e-11,560;UBERON:0010316,1.95e-11,560;UBERON:0005291,1.95e-11,560;UBERON:0006598,1.95e-11,560;UBERON:0010317,1.95e-11,560;UBERON:0002532,1.95e-11,560;UBERON:0002050,3.48e-11,564;UBERON:0005423,1.26e-09,581;UBERON:0000922,2.00e-08,592 | |||
|phase1_expression=10.7190243769628,13.4883330051319,11.2763523276777,8.00586386825043,6.70441641640932,11.3404008133048,10.1319951267324,9.47579810140246,3.3954131665979,8.84642171405432,22.3296373751177,15.9462201655026,16.0897856719357,10.8914390604841,13.2558950291166,10.0848771967766,6.62963980826375,3.65155045193687,8.29485757943862,17.975674479211,17.5440594470058,20.6880116175538,13.7393273822907,12.5924471067053,11.2988375635323,0.764134057479513,0.410502947249729,0.236132343941038,11.4075640286182,7.29275856384704,11.7660253720218,9.19421224478927,10.5422071572388,7.02532619316897,0,0.142169232487422,24.956037343462,16.0658668474244,17.4473669299023,9.98250005292918,21.7198010012727,14.2513213048351,23.1818010870768,30.9698248600473,10.2026504795979,18.9215567726497,15.5727454726809,9.45686142450199,8.981484755958,7.48000220037591,5.89169625016932,4.02019790810595,9.3081333798887,2.5819387343353,4.06279459783025,19.2007186333457,11.7349644524874,6.96642801779762,13.7737751566906,4.49300637906531,5.75403413219137,12.5343494070952,8.57693727773017,9.80316926225197,7.54544020434318,3.40431134814684,3.11411124497787,6.02996796616184,6.77927793946262,4.12658804939722,9.6863920421339,3.68277635987565,4.74693581161327,8.45021145247767,8.07896339867165,6.9187353017764,21.79175444242,22.6767108190675,19.2870704036496,6.84030584978997,6.56425034756997,4.93193215164512,0,0,0,0,0,0,0,0,0,0.587237189370939,0,13.2171328579026,9.52864557068611,12.9058201539788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,1.20460095262218,1.02389288923535,1.24930726552346,0.473554504088034,1.64225599384209,0,0,0,26.8187552945358,20.7917266508127,6.90457833955064,15.1804444001518,17.0454889616202,13.181033225435,6.36228757640879,22.8718389042239,5.2939497611878,4.65631734671384,5.53359149866694,13.7528029272598,14.2075162434091,9.64039551239516,15.9028222890795,17.2388439926275,17.1515769069336,4.29283123749616,2.28797964312051,1.48583000531826,8.34802110940161,3.4409383804245,10.4142150482278,5.6530794192401,10.9069853414576,13.4807840550633,5.43386912995707,10.0782536076038,8.53839030448104,7.02913286805807,18.1273192699116,5.32190474002959,19.5249646038536,9.92690316933846,8.91156142669936,9.10857228497614,8.75664553242062,5.96840846561608,10.7321646226118,14.2389848935219,11.3585081236853,14.495845917967,15.511210565933,12.210633459991,9.93943903390637,7.97772223486853,8.34177839123278,25.5284592466444,9.930714701554,11.2135520028461,11.7423895302675,11.1000396787722,13.38207452219,10.9115644376447,10.4615617992614,24.368545850834,18.43762958336,15.2308930691968,8.74048215124897,4.56377457235559,8.21967743034906,9.62962888878872,9.87424960645602,10.3933596959664,7.55370433643105,10.1952483368767,10.8492070234554,22.572054288359,17.8032189080561,19.1133886006986,28.0261075308333,11.2785196349224,9.75924455001321,4.43302584774693,16.242171972591,11.9530240361618,16.6764245386322,6.57906662328122,31.5725758812397,14.308345050844,9.32500365102072,27.3082897436806,13.9120914471893,23.9605702242435,14.1448810812008,20.5907125334345,10.2308855419259,33.068824425979,17.9497302352484,12.6083924318673,28.7557769938458,13.6015332607314,12.5474838309761,7.15065156704198,4.90943017063502,8.03052867089211,0.975789649036763,1.06023814657188,3.02104251460748,6.94529068602982,2.01856680700503,0.72995471815166,15.6449532329816,29.5890831568727,15.1948413487729,11.1448302727675,6.49691533502627,1.65629520055781,1.85443159085912,0.964044119533928,2.20587945464788,2.17879444092406,2.13543557199987,1.34831308160164,2.15843611637881,1.15424147083917,25.8354409118627,22.4386838085513,18.1092564985816,27.931655163253,6.33775174109154,5.89696330006576,6.49868897349544,0.441463099414651,5.53447973444011,3.94605963686609,17.1210445237456,4.49607013030478,9.24866546187004,7.03672183204825,14.3355654336543,12.4792174233549,8.6598805215164,8.23105875323045,5.16598254637615,9.52818555223087,8.33373922637899,11.7957574385451,22.915927540819,30.0470156733205,25.1141346209145,9.12616634043027,14.1199604174292,5.62403003920662,3.86358894857377,4.25325291727159,4.56748465784526,7.26584846284905,10.7347150166259,0,1.23267807618516,4.35389042635621,6.77363781059719,6.43836410474538,2.41291998310242,9.16772221339866,4.68869788840188,13.6857956818164,4.42158218624291,7.20823338825402,3.14409075893636,12.6708125310258,9.15516144549888,7.6271817253788,5.17086863031111,85.8375470044518,5.917119267892,9.57377219705534,16.6411899058186,18.7761383211364,7.09245660116391,12.2554202347406,13.7258873911822,21.1622426102663,14.8183260620538,6.84045987016844,17.7695974371273,4.75171123760058,8.13886318060882,6.97226766880235,12.4966238977571,14.5948536769429,19.0857694744208,16.8667151586425,7.66799537573064,26.4182452418462,2.85273810081437,5.06734573336527,9.8628634824184,7.16243852959582,0,1.18218456121156,0,0.513372145118994,21.8521376831319,15.6167824629146,17.785642693887,25.6299885961554,18.5002237979417,33.7053160776232,35.89937510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| |||
|short_description=p1@TNRC18 | |||
}} |
Latest revision as of 00:21, 19 September 2015
Short description: | p1@TNRC18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNRC18_5end |
Coexpression cluster: | NA |
Association with transcript: | -219bp_to_ENST00000327499, ENST00000399537, ENST00000399544, ENST00000430969, NM_001080495, uc003soi.3_5end |
EntrezGene: | TNRC18 |
HGNC: | 11962 |
UniProt: | B5ME58C9JS29O15417A3KMH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.46e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
germ layer | 1.95e-11 | 560 |
germ layer / neural crest | 1.95e-11 | 560 |
embryonic tissue | 1.95e-11 | 560 |
presumptive structure | 1.95e-11 | 560 |
germ layer / neural crest derived structure | 1.95e-11 | 560 |
epiblast (generic) | 1.95e-11 | 560 |
embryonic structure | 3.48e-11 | 564 |
developing anatomical structure | 1.26e-09 | 581 |
embryo | 2.00e-08 | 592 |