FFCP PHASE2:Hg19::chr19:48343614..48343629,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1406 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2383 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2383 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 00:59, 19 September 2015
| Short description: | p2@CRX |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CRX_5end |
| Coexpression cluster: | C1736_retinoblastoma_eye_pituitary_Wilms_pineal_small_retina |
| Association with transcript: | 389bp_to_AF335249_5end |
| EntrezGene: | CRX |
| HGNC: | 2383 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CRX |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pineal body | 6.36e-57 | 2 |
| regional part of epithalamus | 6.36e-57 | 2 |
| secretory circumventricular organ | 6.36e-57 | 2 |
| circumventricular organ | 6.36e-57 | 2 |
| epithalamus | 6.36e-57 | 2 |
| cranial nerve II | 1.33e-29 | 1 |
| cranial nerve | 1.33e-29 | 1 |
| nerve trunk | 1.33e-29 | 1 |
| nerve connecting eye with brain | 1.33e-29 | 1 |
| nerve | 1.33e-29 | 1 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| lung small cell carcinoma | 2.43e-08 | 4 |
Showing 1 to 1 of 1 entries
