FFCP PHASE1:Hg19::chr1:67396044..67396071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57708 | |EntrezGene=57708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29657 | |HGNC=29657 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N108 | |UniProt=Q8N108 | ||
|association_with_transcript=118bp_to_ENST00000355356,ENST00000401042,NM_001077701,NM_001077704,uc001ddi.2,uc001ddj.1_5end | |association_with_transcript=118bp_to_ENST00000355356,ENST00000401042,NM_001077701,NM_001077704,uc001ddi.2,uc001ddj.1_5end | ||
|cluster_id=chr1:67396044..67396071,+ | |||
|description=CAGE_peak_3_at_MIER1_5end | |description=CAGE_peak_3_at_MIER1_5end | ||
|id=chr1:67396044..67396071,+ | |id=chr1:67396044..67396071,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.05e-32!140;CL:0000766!5.04e-28!76;CL:0000037!6.64e-27!172;CL:0000566!6.64e-27!172;CL:0002032!2.85e-26!165;CL:0000837!2.85e-26!165;CL:0002031!4.86e-26!124;CL:0000557!2.40e-25!71;CL:0002057!1.54e-24!42;CL:0000839!1.64e-24!70;CL:0000860!6.58e-24!45;CL:0002087!2.74e-23!119;CL:0000763!3.07e-23!112;CL:0000049!3.07e-23!112;CL:0000988!3.77e-23!182;CL:0002009!1.65e-22!65;CL:0002194!1.11e-21!63;CL:0000576!1.11e-21!63;CL:0000040!1.11e-21!63;CL:0000559!1.11e-21!63 | |ontology_enrichment_celltype=CL:0000738!6.05e-32!140;CL:0000766!5.04e-28!76;CL:0000037!6.64e-27!172;CL:0000566!6.64e-27!172;CL:0002032!2.85e-26!165;CL:0000837!2.85e-26!165;CL:0002031!4.86e-26!124;CL:0000557!2.40e-25!71;CL:0002057!1.54e-24!42;CL:0000839!1.64e-24!70;CL:0000860!6.58e-24!45;CL:0002087!2.74e-23!119;CL:0000763!3.07e-23!112;CL:0000049!3.07e-23!112;CL:0000988!3.77e-23!182;CL:0002009!1.65e-22!65;CL:0002194!1.11e-21!63;CL:0000576!1.11e-21!63;CL:0000040!1.11e-21!63;CL:0000559!1.11e-21!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.07e-19;33!CL:0002057;6.07e-19;33!CL:0000576;2.59e-16;48!CL:0000473;4.26e-14;39!CL:0000234;4.26e-14;39!CL:0000766;8.14e-14;69!CL:0002087;1.10e-08;104!CL:0000738;1.83e-07;136!CL:0000763;4.93e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-31,136;CL:0000766,2.96e-28,72;CL:0000037,1.62e-26,168;CL:0002032,6.82e-26,161;CL:0000837,6.82e-26,161;CL:0002031,9.22e-26,120;CL:0000557,1.50e-25,67;CL:0000839,1.06e-24,66;CL:0000860,1.16e-24,42;CL:0002057,1.16e-24,42;CL:0000988,3.85e-23,177;CL:0000763,4.22e-23,108;CL:0000049,4.22e-23,108;CL:0002087,5.38e-23,115;CL:0002009,1.09e-22,61;CL:0000473,2.58e-22,48;CL:0000234,2.58e-22,48;CL:0002194,7.49e-22,59;CL:0000576,7.49e-22,59;CL:0000040,7.49e-22,59;CL:0000559,7.49e-22,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-18;42!CL:0000049;9.35e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-22!102;UBERON:0003061!2.75e-22!102;UBERON:0002371!6.97e-21!80;UBERON:0001474!9.23e-20!86;UBERON:0002193!1.51e-19!112;UBERON:0004765!1.17e-15!101;UBERON:0001434!1.17e-15!101;UBERON:0007023!3.03e-15!115;UBERON:0002405!5.98e-13!115 | |ontology_enrichment_uberon=UBERON:0002390!2.75e-22!102;UBERON:0003061!2.75e-22!102;UBERON:0002371!6.97e-21!80;UBERON:0001474!9.23e-20!86;UBERON:0002193!1.51e-19!112;UBERON:0004765!1.17e-15!101;UBERON:0001434!1.17e-15!101;UBERON:0007023!3.03e-15!115;UBERON:0002405!5.98e-13!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.22e-22,98;UBERON:0003061,3.22e-22,98;UBERON:0002371,6.63e-21,76;UBERON:0001474,1.38e-19,82;UBERON:0002193,2.21e-19,108;UBERON:0002405,1.87e-17,93;UBERON:0004765,2.12e-16,90;UBERON:0007023,2.32e-15,114;UBERON:0001434,2.02e-13,100 | |||
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| ||
|short_description=p3@MIER1 | |short_description=p3@MIER1 | ||
}} | }} |
Latest revision as of 01:28, 19 September 2015
Short description: | p3@MIER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENST00000355356, ENST00000401042, NM_001077701, NM_001077704, uc001ddi.2, uc001ddj.1_5end |
EntrezGene: | MIER1 |
HGNC: | 29657 |
UniProt: | Q8N108 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.11e-31 | 136 |
myeloid leukocyte | 2.96e-28 | 72 |
hematopoietic stem cell | 1.62e-26 | 168 |
hematopoietic oligopotent progenitor cell | 6.82e-26 | 161 |
hematopoietic multipotent progenitor cell | 6.82e-26 | 161 |
hematopoietic lineage restricted progenitor cell | 9.22e-26 | 120 |
granulocyte monocyte progenitor cell | 1.50e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.06e-24 | 66 |
classical monocyte | 1.16e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-24 | 42 |
hematopoietic cell | 3.85e-23 | 177 |
myeloid cell | 4.22e-23 | 108 |
common myeloid progenitor | 4.22e-23 | 108 |
nongranular leukocyte | 5.38e-23 | 115 |
macrophage dendritic cell progenitor | 1.09e-22 | 61 |
defensive cell | 2.58e-22 | 48 |
phagocyte | 2.58e-22 | 48 |
monopoietic cell | 7.49e-22 | 59 |
monocyte | 7.49e-22 | 59 |
monoblast | 7.49e-22 | 59 |
promonocyte | 7.49e-22 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.22e-22 | 98 |
blood island | 3.22e-22 | 98 |
bone marrow | 6.63e-21 | 76 |
bone element | 1.38e-19 | 82 |
hemolymphoid system | 2.21e-19 | 108 |
immune system | 1.87e-17 | 93 |
skeletal element | 2.12e-16 | 90 |
adult organism | 2.32e-15 | 114 |
skeletal system | 2.02e-13 | 100 |