FFCP PHASE1:Hg19::chr2:97426631..97426649,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:97426631..97426649,+ to FFCP PHASE1:Hg19::chr2:97426631..97426649,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26504 | |EntrezGene=26504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=105 | |HGNC=105 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P4Q7 | |UniProt=Q6P4Q7 | ||
|association_with_transcript=0bp_to_ENST00000377075,NM_020184,uc002swx.2_5end | |||
|cluster_id=chr2:97426631..97426649,+ | |||
|description=CAGE_peak_1_at_CNNM4_5end | |||
|id=chr2:97426631..97426649,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.87e-16!76;CL:0000557!1.57e-14!71;CL:0002057!1.85e-14!42;CL:0000738!5.27e-14!140;CL:0002009!5.10e-13!65;CL:0000860!9.70e-13!45;CL:0002194!1.39e-12!63;CL:0000576!1.39e-12!63;CL:0000040!1.39e-12!63;CL:0000559!1.39e-12!63;CL:0000839!2.16e-12!70;CL:0002031!6.21e-12!124;CL:0002087!2.01e-11!119;CL:0002032!2.55e-08!165;CL:0000837!2.55e-08!165;CL:0000988!6.08e-08!182;CL:0000037!7.09e-08!172;CL:0000566!7.09e-08!172;CL:0000763!9.46e-08!112;CL:0000049!9.46e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.21e-13;33!CL:0002057;7.21e-13;33!CL:0000473;3.05e-12;39!CL:0000234;3.05e-12;39!CL:0000576;9.75e-10;48!CL:0000766;1.03e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.73e-18,72;CL:0000557,3.06e-16,67;CL:0000473,3.52e-16,48;CL:0000234,3.52e-16,48;CL:0000738,5.07e-15,136;CL:0002009,1.07e-14,61;CL:0000860,1.85e-14,42;CL:0002057,1.85e-14,42;CL:0002194,2.93e-14,59;CL:0000576,2.93e-14,59;CL:0000040,2.93e-14,59;CL:0000559,2.93e-14,59;CL:0000839,6.40e-14,66;CL:0002031,6.43e-13,120;CL:0002087,2.10e-12,115;CL:0002032,5.93e-09,161;CL:0000837,5.93e-09,161;CL:0000988,9.80e-09,177;CL:0000763,1.62e-08,108;CL:0000049,1.62e-08,108;CL:0000037,1.81e-08,168 | |||
|ontology_enrichment_development_v019=CL:0002057;6.40e-11;42 | |||
|ontology_enrichment_disease=DOID:305!1.79e-09!106;DOID:0050687!4.10e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:299;9.12e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.79e-09,106;DOID:0050687,4.10e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.05e-11!86;UBERON:0002390!5.86e-11!102;UBERON:0003061!5.86e-11!102;UBERON:0002371!6.81e-11!80;UBERON:0002193!8.42e-09!112;UBERON:0002405!5.77e-08!115;UBERON:0004765!7.33e-08!101;UBERON:0001434!7.33e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.86e-12,82;UBERON:0002371,3.84e-12,76;UBERON:0002390,5.17e-12,98;UBERON:0003061,5.17e-12,98;UBERON:0004765,3.42e-10,90;UBERON:0002193,1.21e-09,108;UBERON:0002405,2.69e-09,93;UBERON:0001434,1.58e-07,100 | |||
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| ||
|short_description=p1@CNNM4 | |||
}} | }} |
Latest revision as of 01:38, 19 September 2015
Short description: | p1@CNNM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNNM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377075, NM_020184, uc002swx.2_5end |
EntrezGene: | CNNM4 |
HGNC: | 105 |
UniProt: | Q6P4Q7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.73e-18 | 72 |
granulocyte monocyte progenitor cell | 3.06e-16 | 67 |
defensive cell | 3.52e-16 | 48 |
phagocyte | 3.52e-16 | 48 |
leukocyte | 5.07e-15 | 136 |
macrophage dendritic cell progenitor | 1.07e-14 | 61 |
classical monocyte | 1.85e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-14 | 42 |
monopoietic cell | 2.93e-14 | 59 |
monocyte | 2.93e-14 | 59 |
monoblast | 2.93e-14 | 59 |
promonocyte | 2.93e-14 | 59 |
myeloid lineage restricted progenitor cell | 6.40e-14 | 66 |
hematopoietic lineage restricted progenitor cell | 6.43e-13 | 120 |
nongranular leukocyte | 2.10e-12 | 115 |
hematopoietic oligopotent progenitor cell | 5.93e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.93e-09 | 161 |
hematopoietic cell | 9.80e-09 | 177 |
myeloid cell | 1.62e-08 | 108 |
common myeloid progenitor | 1.62e-08 | 108 |
hematopoietic stem cell | 1.81e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.86e-12 | 82 |
bone marrow | 3.84e-12 | 76 |
hematopoietic system | 5.17e-12 | 98 |
blood island | 5.17e-12 | 98 |
skeletal element | 3.42e-10 | 90 |
hemolymphoid system | 1.21e-09 | 108 |
immune system | 2.69e-09 | 93 |
skeletal system | 1.58e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.79e-09 | 106 |
cell type cancer | 4.10e-07 | 143 |