FFCP PHASE1:Hg19::chrX:110754888..110754909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401613 | |EntrezGene=401613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_033974,uc004eph.2_5end | |association_with_transcript=0bp_to_NR_033974,uc004eph.2_5end | ||
|cluster_id=chrX:110754888..110754909,+ | |||
|description=CAGE_peak_1_at_DKFZp686D0853_5end | |description=CAGE_peak_1_at_DKFZp686D0853_5end | ||
|id=chrX:110754888..110754909,+ | |id=chrX:110754888..110754909,+ | ||
|ontology_enrichment_celltype=CL:0002322!8.11e-09!5;CL:0000148!5.08e-08!10;CL:0000541!5.08e-08!10 | |ontology_enrichment_celltype=CL:0002322!8.11e-09!5;CL:0000148!5.08e-08!10;CL:0000541!5.08e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;9.68e-11;10!CL:0002195;1.64e-10;2!CL:0002571;1.64e-10;2!CL:0000147;1.36e-07;14!CL:0002567;4.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.31e-10,10;CL:0000541,1.31e-10,10;CL:0002195,1.61e-10,2;CL:0002571,1.61e-10,2;CL:0000147,1.68e-07,14;CL:0002567,4.59e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.14e-11;10!UBERON:0007297;1.01e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.02e-07;3!DOID:127;5.02e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.18e-07,3;DOID:127,5.18e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.30e-12!59;UBERON:0000990!1.30e-12!59;UBERON:0003133!2.68e-10!48;UBERON:0007023!1.08e-09!115;UBERON:0003101!2.33e-09!22;UBERON:0000079!2.33e-09!22;UBERON:0003135!1.18e-07!11;UBERON:0006947!4.31e-07!3;UBERON:0004054!4.31e-07!3;UBERON:0000059!5.73e-07!11 | |ontology_enrichment_uberon=UBERON:0005156!1.30e-12!59;UBERON:0000990!1.30e-12!59;UBERON:0003133!2.68e-10!48;UBERON:0007023!1.08e-09!115;UBERON:0003101!2.33e-09!22;UBERON:0000079!2.33e-09!22;UBERON:0003135!1.18e-07!11;UBERON:0006947!4.31e-07!3;UBERON:0004054!4.31e-07!3;UBERON:0000059!5.73e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004175;3.58e-16;21!UBERON:0006947;4.65e-15;3!UBERON:0004054;4.65e-15;3!UBERON:0003101;4.22e-12;22!UBERON:0000079;4.22e-12;22!UBERON:0005156;1.70e-11;59!UBERON:0000990;1.70e-11;59!UBERON:0005904;2.09e-11;4!UBERON:0003135;1.76e-10;11!UBERON:0003133;4.95e-10;44!UBERON:0003975;1.82e-08;18!UBERON:0002107;3.33e-08;19!UBERON:0006925;3.33e-08;19!UBERON:0000077;4.70e-07;27!UBERON:0000474;5.42e-07;37!UBERON:0003134;7.32e-07;33!UBERON:0002106;8.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.78e-18,59;UBERON:0000990,3.78e-18,59;UBERON:0004175,1.92e-16,25;UBERON:0003133,2.30e-15,48;UBERON:0006947,4.66e-15,3;UBERON:0004054,4.66e-15,3;UBERON:0003101,3.63e-12,22;UBERON:0000079,3.63e-12,22;UBERON:0005904,2.10e-11,4;UBERON:0003135,1.75e-10,11;UBERON:0005795,3.61e-09,22;UBERON:0003975,3.90e-09,22;UBERON:0002107,3.23e-08,19;UBERON:0006925,3.23e-08,19;UBERON:0008836,3.23e-08,19;UBERON:0003134,3.42e-08,37;UBERON:0000474,3.42e-08,37;UBERON:0000995,2.97e-07,21;UBERON:0003100,3.05e-07,41;UBERON:0002530,4.02e-07,59;UBERON:0003064,5.21e-07,28;UBERON:0008835,5.27e-07,22;UBERON:0003894,5.27e-07,22;UBERON:0005256,8.51e-07,122 | |||
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| ||
|short_description=p1@DKFZp686D0853 | |short_description=p1@DKFZp686D0853 | ||
}} | }} |
Latest revision as of 01:50, 19 September 2015
Short description: | p1@DKFZp686D0853 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DKFZp686D0853_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_033974, uc004eph.2_5end |
EntrezGene: | DKFZp686D0853 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.31e-10 | 10 |
melanoblast | 1.31e-10 | 10 |
hepatic stem cell | 1.61e-10 | 2 |
hepatic mesenchymal stem cell | 1.61e-10 | 2 |
pigment cell | 1.68e-07 | 14 |
light melanocyte | 4.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 3.78e-18 | 59 |
reproductive system | 3.78e-18 | 59 |
internal genitalia | 1.92e-16 | 25 |
reproductive organ | 2.30e-15 | 48 |
male genital duct | 4.66e-15 | 3 |
internal male genitalia | 4.66e-15 | 3 |
male organism | 3.63e-12 | 22 |
male reproductive system | 3.63e-12 | 22 |
duct of male reproductive system | 2.10e-11 | 4 |
male reproductive organ | 1.75e-10 | 11 |
embryonic uterus | 3.61e-09 | 22 |
internal female genitalia | 3.90e-09 | 22 |
liver | 3.23e-08 | 19 |
digestive gland | 3.23e-08 | 19 |
liver bud | 3.23e-08 | 19 |
female reproductive organ | 3.42e-08 | 37 |
female reproductive system | 3.42e-08 | 37 |
uterus | 2.97e-07 | 21 |
female organism | 3.05e-07 | 41 |
gland | 4.02e-07 | 59 |
intermediate mesoderm | 5.21e-07 | 28 |
hepatic diverticulum | 5.27e-07 | 22 |
liver primordium | 5.27e-07 | 22 |
trunk mesenchyme | 8.51e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.18e-07 | 3 |
leiomyoma | 5.18e-07 | 3 |