FFCP PHASE1:Hg19::chr10:72083665..72083701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55222 | |EntrezGene=55222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23421 | |HGNC=23421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_AL122117_5end | |association_with_transcript=18bp_to_AL122117_5end | ||
|cluster_id=chr10:72083665..72083701,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_LRRC20_5end | |description=CAGE_peak_2_at_LRRC20_5end | ||
|id=chr10:72083665..72083701,- | |id=chr10:72083665..72083701,- | ||
|ontology_enrichment_celltype=CL:0000181!3.94e-16!12;CL:0000417!3.94e-16!12;CL:0000668!3.94e-16!12;CL:0000414!3.94e-16!12;CL:0000412!3.94e-16!12;CL:0000182!3.94e-16!12 | |ontology_enrichment_celltype=CL:0000181!3.94e-16!12;CL:0000417!3.94e-16!12;CL:0000668!3.94e-16!12;CL:0000414!3.94e-16!12;CL:0000412!3.94e-16!12;CL:0000182!3.94e-16!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.64e-67;12!CL:0002593;2.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.30e-67,12;CL:0000223,1.03e-13,58;CL:0002593,2.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.95e-54;11!UBERON:0009497;1.77e-45;13!UBERON:0001041;1.05e-19;30!UBERON:0003104;4.04e-19;31!CL:0000223;2.61e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;9.18e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.95e-07,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.02e-69;19!UBERON:0006925;1.02e-69;19!UBERON:0002423;6.66e-53;25!UBERON:0002365;2.98e-41;31!UBERON:0002330;2.98e-41;31!UBERON:0002368;3.41e-36;33!UBERON:0000949;6.81e-26;43!UBERON:0005172;9.11e-16;52!UBERON:0005173;9.11e-16;52!UBERON:0002417;1.32e-14;58!UBERON:0000916;1.32e-14;58!UBERON:0002530;7.10e-13;57!UBERON:0002456;2.02e-09;2!UBERON:0001007;1.35e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.02e-69,19;UBERON:0006925,1.02e-69,19;UBERON:0008836,1.02e-69,19;UBERON:0008835,3.63e-60,22;UBERON:0003894,3.63e-60,22;UBERON:0009854,1.55e-57,23;UBERON:0007499,6.67e-53,25;UBERON:0009497,6.67e-53,25;UBERON:0000015,6.67e-53,25;UBERON:0002423,6.67e-53,25;UBERON:0006235,6.67e-53,25;UBERON:0004161,6.67e-53,25;UBERON:0009856,7.47e-51,26;UBERON:0002365,1.39e-42,31;UBERON:0002330,1.39e-42,31;UBERON:0002368,1.15e-37,35;UBERON:0000949,3.45e-29,45;UBERON:0003929,3.11e-24,54;UBERON:0005172,3.11e-24,54;UBERON:0005173,3.11e-24,54;UBERON:0002530,3.93e-22,59;UBERON:0002417,9.39e-22,60;UBERON:0000916,9.39e-22,60;UBERON:0005911,9.46e-16,82;UBERON:0001041,8.30e-15,87;UBERON:0009569,5.00e-14,112;UBERON:0003914,2.15e-13,117;UBERON:0005256,8.21e-13,122;UBERON:0005177,1.17e-12,101;UBERON:0004921,1.24e-10,118;UBERON:0000490,2.06e-10,148;UBERON:0003104,1.45e-09,160;UBERON:0009142,1.45e-09,160;UBERON:0002456,2.02e-09,2;UBERON:0001007,1.60e-08,145;UBERON:0001555,1.60e-08,145;UBERON:0007026,1.60e-08,145;UBERON:0000025,9.00e-08,192;UBERON:0001048,1.05e-07,160;UBERON:0004119,1.18e-07,160;UBERON:0000925,1.18e-07,160;UBERON:0006595,1.18e-07,160;UBERON:0002100,1.65e-07,199 | |||
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| ||
|short_description=p2@LRRC20 | |short_description=p2@LRRC20 | ||
}} | }} |
Latest revision as of 01:52, 19 September 2015
Short description: | p2@LRRC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC20_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 18bp_to_AL122117_5end |
EntrezGene: | LRRC20 |
HGNC: | 23421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.30e-67 | 12 |
endodermal cell | 1.03e-13 | 58 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.95e-07 | 39 |