FFCP PHASE1:Hg19::chr2:191513789..191513867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4664 | |EntrezGene=4664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7626 | |HGNC=7626 | ||
|TSSclassifier=strong | |||
|UniProt=Q13506 | |UniProt=Q13506 | ||
|association_with_transcript=0bp_to_ENST00000409581,NM_005966,uc002usb.2,uc010fsc.2_5end | |association_with_transcript=0bp_to_ENST00000409581,NM_005966,uc002usb.2,uc010fsc.2_5end | ||
|cluster_id=chr2:191513789..191513867,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_NAB1_5end | |description=CAGE_peak_1_at_NAB1_5end | ||
|id=chr2:191513789..191513867,+ | |id=chr2:191513789..191513867,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.75e-17!45;CL:0000766!2.26e-16!76;CL:0002057!3.73e-16!42;CL:0000557!9.39e-16!71;CL:0000839!3.44e-14!70;CL:0002009!4.84e-14!65;CL:0002194!5.04e-14!63;CL:0000576!5.04e-14!63;CL:0000040!5.04e-14!63;CL:0000559!5.04e-14!63;CL:0000763!1.57e-08!112;CL:0000049!1.57e-08!112 | |ontology_enrichment_celltype=CL:0000860!4.75e-17!45;CL:0000766!2.26e-16!76;CL:0002057!3.73e-16!42;CL:0000557!9.39e-16!71;CL:0000839!3.44e-14!70;CL:0002009!4.84e-14!65;CL:0002194!5.04e-14!63;CL:0000576!5.04e-14!63;CL:0000040!5.04e-14!63;CL:0000559!5.04e-14!63;CL:0000763!1.57e-08!112;CL:0000049!1.57e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-17;33!CL:0002057;1.17e-17;33!CL:0000473;4.85e-14;39!CL:0000234;4.85e-14;39!CL:0000576;1.71e-10;48!CL:0000766;2.22e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.65e-16,42;CL:0002057,3.65e-16,42;CL:0000473,6.09e-16,48;CL:0000234,6.09e-16,48;CL:0000766,4.75e-15,72;CL:0000557,1.96e-14,67;CL:0000839,6.64e-13,66;CL:0002009,9.57e-13,61;CL:0002194,1.01e-12,59;CL:0000576,1.01e-12,59;CL:0000040,1.01e-12,59;CL:0000559,1.01e-12,59;CL:0000763,1.52e-07,108;CL:0000049,1.52e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.99e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.10e-12!80;UBERON:0002390!6.67e-12!102;UBERON:0003061!6.67e-12!102;UBERON:0001474!3.11e-11!86;UBERON:0002193!7.21e-10!112;UBERON:0004765!8.97e-10!101;UBERON:0001434!8.97e-10!101;UBERON:0002405!1.69e-09!115;UBERON:0000062!5.27e-09!511;UBERON:0002050!4.06e-07!605;UBERON:0005423!4.06e-07!605;UBERON:0000923!7.17e-07!604;UBERON:0005291!7.17e-07!604;UBERON:0006598!7.17e-07!604;UBERON:0002532!7.17e-07!604;UBERON:0001007!9.96e-07!155;UBERON:0001555!9.96e-07!155;UBERON:0007026!9.96e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-11,76;UBERON:0002390,9.25e-11,98;UBERON:0003061,9.25e-11,98;UBERON:0001474,4.48e-10,82;UBERON:0004765,1.18e-09,90;UBERON:0002193,8.26e-09,108;UBERON:0002405,9.82e-09,93;UBERON:0001434,1.45e-08,100 | |||
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| ||
|short_description=p1@NAB1 | |short_description=p1@NAB1 | ||
}} | }} |
Latest revision as of 03:33, 19 September 2015
Short description: | p1@NAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAB1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000409581, NM_005966, uc002usb.2, uc010fsc.2_5end |
EntrezGene: | NAB1 |
HGNC: | 7626 |
UniProt: | Q13506 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.65e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-16 | 42 |
defensive cell | 6.09e-16 | 48 |
phagocyte | 6.09e-16 | 48 |
myeloid leukocyte | 4.75e-15 | 72 |
granulocyte monocyte progenitor cell | 1.96e-14 | 67 |
myeloid lineage restricted progenitor cell | 6.64e-13 | 66 |
macrophage dendritic cell progenitor | 9.57e-13 | 61 |
monopoietic cell | 1.01e-12 | 59 |
monocyte | 1.01e-12 | 59 |
monoblast | 1.01e-12 | 59 |
promonocyte | 1.01e-12 | 59 |
myeloid cell | 1.52e-07 | 108 |
common myeloid progenitor | 1.52e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.50e-11 | 76 |
hematopoietic system | 9.25e-11 | 98 |
blood island | 9.25e-11 | 98 |
bone element | 4.48e-10 | 82 |
skeletal element | 1.18e-09 | 90 |
hemolymphoid system | 8.26e-09 | 108 |
immune system | 9.82e-09 | 93 |
skeletal system | 1.45e-08 | 100 |