FFCP PHASE1:Hg19::chr19:49232666..49232758,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54922 | |EntrezGene=54922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24716 | |HGNC=24716 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L251 | |UniProt=Q7L251 | ||
|association_with_transcript=-313bp_to_BC021860_5end | |association_with_transcript=-313bp_to_BC021860_5end | ||
|cluster_id=chr19:49232666..49232758,- | |||
|description=CAGE_peak_1_at_RASIP1_5end | |description=CAGE_peak_1_at_RASIP1_5end | ||
|id=chr19:49232666..49232758,- | |id=chr19:49232666..49232758,- | ||
Latest revision as of 03:55, 19 September 2015
| Short description: | p1@RASIP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RASIP1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -313bp_to_BC021860_5end |
| EntrezGene: | RASIP1 |
| HGNC: | 24716 |
| UniProt: | Q7L251 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RASIP1 |
|---|
0
10
20
30
40
50
60
70
80
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle cell | 4.79e-12 | 55 |
| muscle precursor cell | 1.09e-10 | 58 |
| myoblast | 1.09e-10 | 58 |
| multi-potent skeletal muscle stem cell | 1.09e-10 | 58 |
| electrically responsive cell | 1.33e-10 | 61 |
| electrically active cell | 1.33e-10 | 61 |
| smooth muscle cell | 2.03e-08 | 43 |
| smooth muscle myoblast | 2.03e-08 | 43 |
| ecto-epithelial cell | 1.87e-07 | 34 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 7.18e-13 | 78 |
| multilaminar epithelium | 3.25e-12 | 83 |
| somite | 1.89e-11 | 71 |
| presomitic mesoderm | 1.89e-11 | 71 |
| presumptive segmental plate | 1.89e-11 | 71 |
| dermomyotome | 1.89e-11 | 71 |
| trunk paraxial mesoderm | 1.89e-11 | 71 |
| paraxial mesoderm | 4.58e-11 | 72 |
| presumptive paraxial mesoderm | 4.58e-11 | 72 |
| dense mesenchyme tissue | 1.07e-10 | 73 |
Showing 1 to 10 of 35 entries
