FFCP PHASE1:Hg19::chrX:11786498..11786511,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:11786498..11786511,+
|short_description=p10@MSL3
|description=CAGE_peak_10_at_MSL3_5end
|association_with_transcript=66bp_to_ENST00000473380_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10943 | |EntrezGene=10943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7370 | |HGNC=7370 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENST00000473380_5end | |||
|cluster_id=chrX:11786498..11786511,+ | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_10_at_MSL3_5end | |||
|id=chrX:11786498..11786511,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.58e-26!24;CL:0000826!6.58e-26!24;CL:0000451!5.54e-20!10;CL:0000453!4.36e-15!5;CL:0000784!6.86e-15!3;CL:0000738!3.02e-13!140;CL:0000990!8.52e-13!8;CL:0000542!3.91e-12!53;CL:0000051!3.91e-12!53;CL:0000838!1.48e-10!52;CL:0000785!2.93e-10!2;CL:0000955!2.93e-10!2;CL:0000818!2.93e-10!2;CL:0000954!2.93e-10!2;CL:0000816!2.93e-10!2;CL:0000037!8.83e-10!172;CL:0000566!8.83e-10!172;CL:0000988!5.95e-09!182;CL:0002032!2.51e-08!165;CL:0000837!2.51e-08!165;CL:0000236!4.61e-08!14;CL:0000817!4.17e-07!3;CL:0002031!7.23e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.09e-36;24!CL:0000784;1.29e-24;3!CL:0000946;8.95e-20;1!CL:0000786;8.95e-20;1!CL:0000451;3.42e-15;10!CL:0000840;7.78e-13;5!CL:0001014;3.13e-10;2!CL:0001016;3.13e-10;2!CL:0000990;7.16e-09;8!CL:0000542;1.87e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-36,24;CL:0000826,1.09e-36,24;CL:0000784,1.29e-24,3;CL:0000946,8.95e-20,1;CL:0000786,8.95e-20,1;CL:0000980,8.95e-20,1;CL:0000838,7.76e-17,52;CL:0000542,1.63e-16,53;CL:0000051,1.63e-16,53;CL:0000451,3.68e-15,10;CL:0000840,8.78e-13,5;CL:0001029,8.78e-13,5;CL:0000738,1.50e-12,136;CL:0002031,1.53e-11,120;CL:0000785,1.43e-10,2;CL:0000955,1.43e-10,2;CL:0000818,1.43e-10,2;CL:0000954,1.43e-10,2;CL:0000816,1.43e-10,2;CL:0001014,3.58e-10,2;CL:0001016,3.58e-10,2;CL:0000037,4.85e-10,168;CL:0002087,1.53e-09,115;CL:0000988,1.70e-09,177;CL:0000990,7.75e-09,8;CL:0002032,1.87e-08,161;CL:0000837,1.87e-08,161;CL:0000817,1.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.43e-10;2!CL:0000051;1.87e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.88e-19;1!DOID:0050177;1.88e-19;1!DOID:0050427;1.88e-19;1!DOID:0060058;4.04e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.88e-19,1;DOID:0050177,1.88e-19,1;DOID:0050427,1.88e-19,1;DOID:0060058,3.90e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.89e-14!3;UBERON:0004854!4.89e-14!3;UBERON:0009034!4.89e-14!3;UBERON:0002095!4.89e-14!3;UBERON:0004782!4.89e-14!3;UBERON:0003281!4.89e-14!3;UBERON:0009664!4.89e-14!3;UBERON:0002296!4.89e-14!3;UBERON:0005602!4.89e-14!3;UBERON:0001179!4.89e-14!3;UBERON:0006293!4.89e-14!3;UBERON:0004177!2.13e-10!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.79e-07,3;UBERON:0004854,2.79e-07,3;UBERON:0009034,2.79e-07,3;UBERON:0002095,2.79e-07,3;UBERON:0004782,2.79e-07,3;UBERON:0003281,2.79e-07,3;UBERON:0009664,2.79e-07,3;UBERON:0002296,2.79e-07,3;UBERON:0005602,2.79e-07,3;UBERON:0001179,2.79e-07,3;UBERON:0006293,2.79e-07,3 | |||
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| ||
|short_description=p10@MSL3 | |||
}} | }} |
Latest revision as of 04:21, 19 September 2015
Short description: | p10@MSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MSL3_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | 66bp_to_ENST00000473380_5end |
EntrezGene: | MSL3 |
HGNC: | 7370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.09e-36 | 24 |
pro-B cell | 1.09e-36 | 24 |
plasmacytoid dendritic cell | 1.29e-24 | 3 |
antibody secreting cell | 8.95e-20 | 1 |
plasma cell | 8.95e-20 | 1 |
plasmablast | 8.95e-20 | 1 |
lymphoid lineage restricted progenitor cell | 7.76e-17 | 52 |
lymphocyte | 1.63e-16 | 53 |
common lymphoid progenitor | 1.63e-16 | 53 |
dendritic cell | 3.68e-15 | 10 |
immature conventional dendritic cell | 8.78e-13 | 5 |
common dendritic progenitor | 8.78e-13 | 5 |
leukocyte | 1.50e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.53e-11 | 120 |
mature B cell | 1.43e-10 | 2 |
pre-B-II cell | 1.43e-10 | 2 |
transitional stage B cell | 1.43e-10 | 2 |
small pre-B-II cell | 1.43e-10 | 2 |
immature B cell | 1.43e-10 | 2 |
CD1a-positive Langerhans cell | 3.58e-10 | 2 |
immature CD1a-positive Langerhans cell | 3.58e-10 | 2 |
hematopoietic stem cell | 4.85e-10 | 168 |
nongranular leukocyte | 1.53e-09 | 115 |
hematopoietic cell | 1.70e-09 | 177 |
conventional dendritic cell | 7.75e-09 | 8 |
hematopoietic oligopotent progenitor cell | 1.87e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-08 | 161 |
precursor B cell | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.79e-07 | 3 |
gastrointestinal system mesentery | 2.79e-07 | 3 |
stomach region | 2.79e-07 | 3 |
mesentery | 2.79e-07 | 3 |
gastrointestinal system serosa | 2.79e-07 | 3 |
mesentery of stomach | 2.79e-07 | 3 |
gut mesentery | 2.79e-07 | 3 |
dorsal mesentery | 2.79e-07 | 3 |
dorsal mesogastrium | 2.79e-07 | 3 |
peritoneal cavity | 2.79e-07 | 3 |
spleen primordium | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.88e-19 | 1 |
monogenic disease | 1.88e-19 | 1 |
xeroderma pigmentosum | 1.88e-19 | 1 |
lymphoma | 3.90e-08 | 10 |