FFCP PHASE1:Hg19::chr6:49604594..49604605,-: Difference between revisions
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|id=chr6:49604594..49604605,-
|short_description=p4@RHAG
|description=CAGE_peak_4_at_RHAG_5end
|association_with_transcript=-7bp_to_NM_000324,uc003ozk.3,uc010jzl.2,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6005 | |EntrezGene=6005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10006 | |HGNC=10006 | ||
|TSSclassifier=strong | |||
|UniProt=Q02094,Q96E98 | |UniProt=Q02094,Q96E98 | ||
|association_with_transcript=-7bp_to_NM_000324,uc003ozk.3,uc010jzl.2,uc010jzm.2_5end | |||
|cluster_id=chr6:49604594..49604605,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_4_at_RHAG_5end | |||
|id=chr6:49604594..49604605,- | |||
|ontology_enrichment_celltype=CL:0000763!1.50e-12!112;CL:0000049!1.50e-12!112;CL:0000764!2.45e-11!2;CL:0000765!2.45e-11!2;CL:0000050!2.45e-11!2;CL:0000038!2.45e-11!2;CL:0000558!2.45e-11!2;CL:0000547!2.45e-11!2;CL:0000549!2.45e-11!2;CL:0000550!2.45e-11!2;CL:0000552!2.45e-11!2;CL:0002032!3.97e-07!165;CL:0000837!3.97e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.15e-22;2!CL:0000558;9.15e-22;2!CL:0000763;5.59e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.15e-22,2;CL:0000765,9.15e-22,2;CL:0000050,9.15e-22,2;CL:0000038,9.15e-22,2;CL:0000558,9.15e-22,2;CL:0000547,9.15e-22,2;CL:0000549,9.15e-22,2;CL:0000550,9.15e-22,2;CL:0000552,9.15e-22,2;CL:0000763,1.81e-18,108;CL:0000049,1.81e-18,108;CL:0002032,1.15e-11,161;CL:0000837,1.15e-11,161;CL:0000037,4.39e-11,168;CL:0000988,2.11e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000049;1.35e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.47e-41!31;DOID:1240!3.30e-32!39;DOID:1036!8.17e-30!8;DOID:2531!1.10e-23!51;DOID:0060083!1.10e-23!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.41e-51;31!DOID:1036;3.15e-45;8!DOID:1240;9.26e-32;39!DOID:2531;2.81e-21;51!DOID:0060083;2.81e-21;51!DOID:9119;1.31e-11;1!DOID:8552;2.68e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.23e-52,31;DOID:1036,3.03e-45,8;DOID:1240,2.90e-41,39;DOID:2531,4.06e-31,51;DOID:0060083,4.06e-31,51;DOID:9119,1.31e-11,1;DOID:8552,2.68e-11,1;DOID:0050686,3.00e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.81e-11!15;UBERON:0000179!9.81e-11!15;UBERON:0000463!9.81e-11!15;UBERON:0002106!4.62e-07!3;UBERON:0004854!4.62e-07!3;UBERON:0009034!4.62e-07!3;UBERON:0002095!4.62e-07!3;UBERON:0004782!4.62e-07!3;UBERON:0003281!4.62e-07!3;UBERON:0009664!4.62e-07!3;UBERON:0002296!4.62e-07!3;UBERON:0005602!4.62e-07!3;UBERON:0001179!4.62e-07!3;UBERON:0006293!4.62e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@RHAG | |||
}} | }} |
Latest revision as of 04:51, 19 September 2015
Short description: | p4@RHAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RHAG_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -7bp_to_NM_000324, uc003ozk.3, uc010jzl.2, uc010jzm.2_5end |
EntrezGene: | RHAG |
HGNC: | 10006 |
UniProt: | Q02094Q96E98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.15e-22 | 2 |
erythroblast | 9.15e-22 | 2 |
megakaryocyte-erythroid progenitor cell | 9.15e-22 | 2 |
erythroid progenitor cell | 9.15e-22 | 2 |
reticulocyte | 9.15e-22 | 2 |
proerythroblast | 9.15e-22 | 2 |
basophilic erythroblast | 9.15e-22 | 2 |
polychromatophilic erythroblast | 9.15e-22 | 2 |
orthochromatic erythroblast | 9.15e-22 | 2 |
myeloid cell | 1.81e-18 | 108 |
common myeloid progenitor | 1.81e-18 | 108 |
hematopoietic oligopotent progenitor cell | 1.15e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-11 | 161 |
hematopoietic stem cell | 4.39e-11 | 168 |
hematopoietic cell | 2.11e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.23e-52 | 31 |
chronic leukemia | 3.03e-45 | 8 |
leukemia | 2.90e-41 | 39 |
hematologic cancer | 4.06e-31 | 51 |
immune system cancer | 4.06e-31 | 51 |
acute myeloid leukemia | 1.31e-11 | 1 |
chronic myeloid leukemia | 2.68e-11 | 1 |
organ system cancer | 3.00e-10 | 137 |