FFCP PHASE1:Hg19::chr3:100211526..100211584,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25480 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9J9Z5 | ||
|association_with_transcript=22bp_to_ENST00000449609_5end | |association_with_transcript=22bp_to_ENST00000449609_5end | ||
|cluster_id=chr3:100211526..100211584,+ | |cluster_id=chr3:100211526..100211584,+ |
Latest revision as of 05:11, 19 September 2015
Short description: | p2@TMEM45A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM45A_5end |
Coexpression cluster: | C4255_Adipocyte_amniotic_Smooth_Chondrocyte_chorionic_Ewing_Preadipocyte |
Association with transcript: | 22bp_to_ENST00000449609_5end |
EntrezGene: | TMEM45A |
HGNC: | 25480 |
UniProt: | C9J9Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@TMEM45A |
---|
0
20
40
60
80
100
120
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.94e-16 | 58 |
myoblast | 2.94e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.94e-16 | 58 |
muscle cell | 6.29e-15 | 55 |
fibroblast | 2.94e-14 | 76 |
smooth muscle cell | 5.65e-14 | 43 |
smooth muscle myoblast | 5.65e-14 | 43 |
electrically responsive cell | 2.61e-12 | 61 |
electrically active cell | 2.61e-12 | 61 |
vascular associated smooth muscle cell | 1.56e-11 | 32 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.68e-17 | 83 |
somite | 3.87e-17 | 71 |
presomitic mesoderm | 3.87e-17 | 71 |
presumptive segmental plate | 3.87e-17 | 71 |
dermomyotome | 3.87e-17 | 71 |
trunk paraxial mesoderm | 3.87e-17 | 71 |
dense mesenchyme tissue | 5.20e-17 | 73 |
paraxial mesoderm | 1.53e-16 | 72 |
presumptive paraxial mesoderm | 1.53e-16 | 72 |
trunk mesenchyme | 1.05e-15 | 122 |
Showing 1 to 10 of 48 entries