FFCP PHASE1:Hg19::chr5:90679145..90679152,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:90679145..90679152,-
|short_description=p3@ARRDC3
|description=CAGE_peak_3_at_ARRDC3_5end
|association_with_transcript=0bp_to_NM_020801,uc003kjz.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57561 | |EntrezGene=57561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29263 | |HGNC=29263 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B67 | |UniProt=Q96B67 | ||
|association_with_transcript=0bp_to_NM_020801,uc003kjz.2_5end | |||
|cluster_id=chr5:90679145..90679152,- | |||
|coexpression_cluster_id=C4528 | |||
|description=CAGE_peak_3_at_ARRDC3_5end | |||
|id=chr5:90679145..90679152,- | |||
|ontology_enrichment_celltype=CL:0000766!1.59e-16!76;CL:0002057!1.70e-16!42;CL:0000860!1.92e-14!45;CL:0000839!1.24e-12!70;CL:0000557!2.37e-12!71;CL:0002009!3.92e-11!65;CL:0000738!1.24e-10!140;CL:0002194!1.70e-10!63;CL:0000576!1.70e-10!63;CL:0000040!1.70e-10!63;CL:0000559!1.70e-10!63;CL:0000763!3.52e-09!112;CL:0000049!3.52e-09!112;CL:0002031!2.41e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.77e-13;33!CL:0002057;9.77e-13;33!CL:0000473;1.20e-10;39!CL:0000234;1.20e-10;39!CL:0000576;1.23e-10;48!CL:0000766;2.24e-10;69!CL:0000094;3.73e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.27e-19,72;CL:0000860,6.23e-18,42;CL:0002057,6.23e-18,42;CL:0000473,8.20e-18,48;CL:0000234,8.20e-18,48;CL:0000839,2.12e-14,66;CL:0000557,2.46e-14,67;CL:0002009,1.07e-12,61;CL:0000738,5.57e-12,136;CL:0002194,5.69e-12,59;CL:0000576,5.69e-12,59;CL:0000040,5.69e-12,59;CL:0000559,5.69e-12,59;CL:0000763,1.33e-10,108;CL:0000049,1.33e-10,108;CL:0002031,2.42e-09,120;CL:0002032,1.77e-07,161;CL:0000837,1.77e-07,161;CL:0000094,4.11e-07,8;CL:0000037,5.10e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;9.65e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.79e-14!112;UBERON:0002390!3.74e-13!102;UBERON:0003061!3.74e-13!102;UBERON:0002371!1.33e-11!80;UBERON:0001474!2.02e-10!86;UBERON:0004765!2.02e-09!101;UBERON:0001434!2.02e-09!101;UBERON:0002405!2.02e-09!115;UBERON:0007023!7.95e-09!115;UBERON:0002204!4.99e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.17e-15,108;UBERON:0002390,4.01e-15,98;UBERON:0003061,4.01e-15,98;UBERON:0002405,3.07e-14,93;UBERON:0002371,8.40e-14,76;UBERON:0001474,3.36e-12,82;UBERON:0004765,1.95e-11,90;UBERON:0001434,3.49e-11,100;UBERON:0007023,4.89e-08,114;UBERON:0002204,1.07e-07,167 | |||
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| ||
|short_description=p3@ARRDC3 | |||
}} | }} |
Latest revision as of 05:15, 19 September 2015
Short description: | p3@ARRDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARRDC3_5end |
Coexpression cluster: | C4528_Neutrophils_renal_lung_blood_CD4_chorionic_Mast |
Association with transcript: | 0bp_to_NM_020801, uc003kjz.2_5end |
EntrezGene: | ARRDC3 |
HGNC: | 29263 |
UniProt: | Q96B67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.27e-19 | 72 |
classical monocyte | 6.23e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.23e-18 | 42 |
defensive cell | 8.20e-18 | 48 |
phagocyte | 8.20e-18 | 48 |
myeloid lineage restricted progenitor cell | 2.12e-14 | 66 |
granulocyte monocyte progenitor cell | 2.46e-14 | 67 |
macrophage dendritic cell progenitor | 1.07e-12 | 61 |
leukocyte | 5.57e-12 | 136 |
monopoietic cell | 5.69e-12 | 59 |
monocyte | 5.69e-12 | 59 |
monoblast | 5.69e-12 | 59 |
promonocyte | 5.69e-12 | 59 |
myeloid cell | 1.33e-10 | 108 |
common myeloid progenitor | 1.33e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 2.42e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.77e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-07 | 161 |
granulocyte | 4.11e-07 | 8 |
hematopoietic stem cell | 5.10e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.17e-15 | 108 |
hematopoietic system | 4.01e-15 | 98 |
blood island | 4.01e-15 | 98 |
immune system | 3.07e-14 | 93 |
bone marrow | 8.40e-14 | 76 |
bone element | 3.36e-12 | 82 |
skeletal element | 1.95e-11 | 90 |
skeletal system | 3.49e-11 | 100 |
adult organism | 4.89e-08 | 114 |
musculoskeletal system | 1.07e-07 | 167 |