FFCP PHASE1:Hg19::chr12:54694979..54694993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22818 | |EntrezGene=22818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2243 | |HGNC=2243 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXB1 | |UniProt=F8VXB1 | ||
|association_with_transcript=0bp_to_ENST00000552848_5end | |association_with_transcript=0bp_to_ENST00000552848_5end | ||
|cluster_id=chr12:54694979..54694993,+ | |||
|coexpression_cluster_id=C1677 | |||
|description=CAGE_peak_2_at_COPZ1_5end | |description=CAGE_peak_2_at_COPZ1_5end | ||
|id=chr12:54694979..54694993,+ | |id=chr12:54694979..54694993,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.00e-43!112;CL:0000049!4.00e-43!112;CL:0000037!2.49e-28!172;CL:0000566!2.49e-28!172;CL:0002032!6.53e-27!165;CL:0000837!6.53e-27!165;CL:0000988!4.17e-26!182;CL:0000839!2.60e-13!70;CL:0002057!3.58e-13!42;CL:0000766!3.60e-13!76;CL:0000860!4.87e-12!45;CL:0002194!6.86e-11!63;CL:0000576!6.86e-11!63;CL:0000040!6.86e-11!63;CL:0000559!6.86e-11!63;CL:0002009!2.01e-10!65;CL:0000557!2.39e-10!71;CL:0000134!1.55e-07!358;CL:0002320!3.50e-07!365;CL:0000764!6.84e-07!2;CL:0000765!6.84e-07!2;CL:0000050!6.84e-07!2;CL:0000038!6.84e-07!2;CL:0000558!6.84e-07!2;CL:0000547!6.84e-07!2;CL:0000549!6.84e-07!2;CL:0000550!6.84e-07!2;CL:0000552!6.84e-07!2 | |ontology_enrichment_celltype=CL:0000763!4.00e-43!112;CL:0000049!4.00e-43!112;CL:0000037!2.49e-28!172;CL:0000566!2.49e-28!172;CL:0002032!6.53e-27!165;CL:0000837!6.53e-27!165;CL:0000988!4.17e-26!182;CL:0000839!2.60e-13!70;CL:0002057!3.58e-13!42;CL:0000766!3.60e-13!76;CL:0000860!4.87e-12!45;CL:0002194!6.86e-11!63;CL:0000576!6.86e-11!63;CL:0000040!6.86e-11!63;CL:0000559!6.86e-11!63;CL:0002009!2.01e-10!65;CL:0000557!2.39e-10!71;CL:0000134!1.55e-07!358;CL:0002320!3.50e-07!365;CL:0000764!6.84e-07!2;CL:0000765!6.84e-07!2;CL:0000050!6.84e-07!2;CL:0000038!6.84e-07!2;CL:0000558!6.84e-07!2;CL:0000547!6.84e-07!2;CL:0000549!6.84e-07!2;CL:0000550!6.84e-07!2;CL:0000552!6.84e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000037;3.10e-10;1!CL:0001024;3.10e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,3.71e-10,1;CL:0000763,1.58e-09,108;CL:0000049,1.58e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.62e-45!31;DOID:1240!7.95e-35!39;DOID:2531!2.25e-27!51;DOID:0060083!2.25e-27!51;DOID:1036!3.32e-13!8;DOID:0050686!5.73e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.19e-30;31!DOID:1240;7.22e-20;39!DOID:2531;1.07e-12;51!DOID:0060083;1.07e-12;51!DOID:8552;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.21e-32,31;DOID:1240,2.89e-25,39;DOID:2531,6.48e-19,51;DOID:0060083,6.48e-19,51;DOID:8552,4.85e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-18!102;UBERON:0003061!1.81e-18!102;UBERON:0002193!4.02e-16!112;UBERON:0000178!5.55e-12!15;UBERON:0000179!5.55e-12!15;UBERON:0000463!5.55e-12!15;UBERON:0002371!7.30e-10!80;UBERON:0001474!7.61e-09!86;UBERON:0002405!8.92e-08!115;UBERON:0004765!7.48e-07!101;UBERON:0001434!7.48e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.76e-20;15!UBERON:0000179;3.76e-20;15!UBERON:0000463;3.76e-20;15!UBERON:0002390;5.73e-12;32!UBERON:0002193;8.62e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.94e-20,15;UBERON:0000179,4.94e-20,15;UBERON:0000463,4.94e-20,15 | |||
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| ||
|short_description=p2@COPZ1 | |short_description=p2@COPZ1 | ||
}} | }} |
Latest revision as of 05:49, 19 September 2015
Short description: | p2@COPZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COPZ1_5end |
Coexpression cluster: | C1677_acute_CD34_CD133_chronic_Whole_leukemia_myelodysplastic |
Association with transcript: | 0bp_to_ENST00000552848_5end |
EntrezGene: | COPZ1 |
HGNC: | 2243 |
UniProt: | F8VXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 3.71e-10 | 1 |
myeloid cell | 1.58e-09 | 108 |
common myeloid progenitor | 1.58e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 4.94e-20 | 15 |
haemolymphatic fluid | 4.94e-20 | 15 |
organism substance | 4.94e-20 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.21e-32 | 31 |
leukemia | 2.89e-25 | 39 |
hematologic cancer | 6.48e-19 | 51 |
immune system cancer | 6.48e-19 | 51 |
chronic myeloid leukemia | 4.85e-10 | 1 |