FFCP PHASE1:Hg19::chr4:8873531..8873542,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3166 | |EntrezGene=3166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5017 | |HGNC=5017 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP08 | |UniProt=Q9NP08 | ||
|association_with_transcript=0bp_to_ENST00000400677,NM_018942,uc003izz.1_5end | |association_with_transcript=0bp_to_ENST00000400677,NM_018942,uc003izz.1_5end | ||
|cluster_id=chr4:8873531..8873542,- | |||
|coexpression_cluster_id=C369 | |coexpression_cluster_id=C369 | ||
|description=CAGE_peak_4_at_HMX1_5end | |description=CAGE_peak_4_at_HMX1_5end | ||
|id=chr4:8873531..8873542,- | |id=chr4:8873531..8873542,- | ||
|ontology_enrichment_celltype=CL:0000064!3.12e-14!3;CL:0005012!3.12e-14!3;CL:0000067!3.12e-14!3;CL:0002304!3.12e-14!3;CL:0002322!3.70e-08!5;CL:0000133!1.58e-07!59;CL:0000710!2.95e-07!20;CL:0000075!5.11e-07!27 | |ontology_enrichment_celltype=CL:0000064!3.12e-14!3;CL:0005012!3.12e-14!3;CL:0000067!3.12e-14!3;CL:0002304!3.12e-14!3;CL:0002322!3.70e-08!5;CL:0000133!1.58e-07!59;CL:0000710!2.95e-07!20;CL:0000075!5.11e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.98e-38;3!CL:0000067;1.98e-38;3!CL:0005012;1.98e-38;3!CL:0002304;1.98e-38;3!CL:0000313;2.73e-29;1!CL:0000159;2.21e-15;2!CL:0000214;1.04e-10;3!CL:0000075;3.41e-10;27!CL:0000306;1.70e-08;4!CL:0002222;1.70e-08;4!CL:0002224;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.18e-38,3;CL:0000067,2.18e-38,3;CL:0005012,2.18e-38,3;CL:0002304,2.18e-38,3;CL:0000313,2.37e-29,1;CL:0000159,2.05e-15,2;CL:0000214,1.20e-10,3;CL:0000075,3.47e-10,27;CL:0000306,1.70e-08,4;CL:0002222,1.70e-08,4;CL:0002224,1.70e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.04e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;2.73e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.37e-29,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001778;1.98e-38;3!UBERON:0001775;1.98e-38;3!UBERON:0000970;1.33e-35;20!UBERON:0002104;6.18e-34;21!UBERON:0000020;4.92e-31;23!UBERON:0001032;9.15e-30;24!UBERON:0004456;9.15e-30;24!UBERON:0004911;2.73e-29;1!UBERON:0000488;3.92e-29;4!UBERON:0000019;2.77e-24;19!UBERON:0000047;2.77e-24;19!UBERON:0004088;2.77e-24;19!UBERON:0010230;2.77e-24;19!UBERON:0007625;6.87e-24;11!UBERON:0001456;4.92e-22;21!UBERON:0002203;8.22e-20;6!UBERON:0001768;8.22e-20;6!UBERON:0002200;8.22e-20;6!UBERON:0001801;5.91e-19;14!UBERON:0004909;2.21e-15;2!UBERON:0006876;2.76e-11;11!UBERON:0006915;1.04e-10;3!UBERON:0007616;1.04e-10;3!UBERON:0002217;1.04e-10;3!UBERON:0002018;1.04e-10;3!UBERON:0010371;8.62e-09;31!UBERON:0010077;1.70e-08;4!UBERON:0005389;1.70e-08;4!UBERON:0000484;1.70e-08;4!UBERON:0000965;1.70e-08;4!UBERON:0001803;1.70e-08;4!UBERON:0000966;6.21e-07;5!UBERON:0005388;6.21e-07;5!UBERON:0001802;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.18e-38,3;UBERON:0001775,2.18e-38,3;UBERON:0000970,5.77e-34,21;UBERON:0002104,5.77e-34,21;UBERON:0000020,8.62e-30,24;UBERON:0001032,8.62e-30,24;UBERON:0004456,8.62e-30,24;UBERON:0004911,2.37e-29,1;UBERON:0000488,4.21e-29,4;UBERON:0007625,7.14e-24,11;UBERON:0000019,3.96e-23,20;UBERON:0000047,3.96e-23,20;UBERON:0010312,3.96e-23,20;UBERON:0004088,3.96e-23,20;UBERON:0010230,3.96e-23,20;UBERON:0003072,3.96e-23,20;UBERON:0004128,3.96e-23,20;UBERON:0003071,3.96e-23,20;UBERON:0001456,4.38e-21,22;UBERON:0002203,8.63e-20,6;UBERON:0001768,8.63e-20,6;UBERON:0002200,8.63e-20,6;UBERON:0001801,6.09e-19,14;UBERON:0004909,2.05e-15,2;UBERON:0005085,3.88e-15,31;UBERON:0006876,2.83e-11,11;UBERON:0006915,1.20e-10,3;UBERON:0007616,1.20e-10,3;UBERON:0002217,1.20e-10,3;UBERON:0002018,1.20e-10,3;UBERON:0001444,9.18e-10,49;UBERON:0000033,1.34e-08,56;UBERON:0010077,1.70e-08,4;UBERON:0005389,1.70e-08,4;UBERON:0000484,1.70e-08,4;UBERON:0002546,1.70e-08,4;UBERON:0000965,1.70e-08,4;UBERON:0001803,1.70e-08,4;UBERON:0003073,1.70e-08,4;UBERON:0005426,1.70e-08,4;UBERON:0000153,8.30e-08,62;UBERON:0007811,8.30e-08,62;UBERON:0003056,8.30e-08,61 | |||
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|short_description=p4@HMX1 | |short_description=p4@HMX1 | ||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p4@HMX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HMX1_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | 0bp_to_ENST00000400677, NM_018942, uc003izz.1_5end |
EntrezGene: | HMX1 |
HGNC: | 5017 |
UniProt: | Q9NP08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.18e-38 | 3 |
ciliated epithelial cell | 2.18e-38 | 3 |
multi-ciliated epithelial cell | 2.18e-38 | 3 |
non-pigmented ciliary epithelial cell | 2.18e-38 | 3 |
serous secreting cell | 2.37e-29 | 1 |
seromucus secreting cell | 2.05e-15 | 2 |
synovial cell | 1.20e-10 | 3 |
columnar/cuboidal epithelial cell | 3.47e-10 | 27 |
crystallin accumulating cell | 1.70e-08 | 4 |
vertebrate lens cell | 1.70e-08 | 4 |
lens epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.37e-29 | 1 |