FFCP PHASE1:Hg19::chr8:8244121..8244132,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:8244121..8244132,-
|short_description=p9@SGK223
|description=CAGE_peak_9_at_SGK223_5end
|association_with_transcript=-113bp_to_ENST00000520004_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=157285 | |EntrezGene=157285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E5RFL5 | |UniProt=E5RFL5 | ||
|association_with_transcript=-113bp_to_ENST00000520004_5end | |||
|cluster_id=chr8:8244121..8244132,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_9_at_SGK223_5end | |||
|id=chr8:8244121..8244132,- | |||
|ontology_enrichment_celltype=CL:0002322!1.19e-08!5;CL:0000128!8.02e-08!7;CL:0000126!8.02e-08!7;CL:0000127!8.02e-08!7;CL:0002453!8.02e-08!7;CL:0002605!1.68e-07!3;CL:0002548!9.51e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0002548;9.07e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15!CL:0002494;1.54e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0002548,9.07e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15;CL:0002494,1.54e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.04e-09!25;UBERON:0000203!2.04e-09!25;UBERON:0002791!2.64e-09!33;UBERON:0003056!4.36e-09!61;UBERON:0002020!4.92e-09!34;UBERON:0003528!4.92e-09!34;UBERON:0001893!6.03e-09!34;UBERON:0001869!2.42e-08!32;UBERON:0001017!4.89e-08!82;UBERON:0002780!4.91e-08!41;UBERON:0001890!4.91e-08!41;UBERON:0006240!4.91e-08!41;UBERON:0003080!9.06e-08!42;UBERON:0003075!1.72e-07!86;UBERON:0007284!1.72e-07!86;UBERON:0005743!2.00e-07!86;UBERON:0002616!2.66e-07!59;UBERON:0000955!3.21e-07!69;UBERON:0006238!3.21e-07!69;UBERON:0000073!5.99e-07!94;UBERON:0001016!5.99e-07!94;UBERON:0002346!6.26e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
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| ||
|short_description=p9@SGK223 | |||
}} | }} |
Latest revision as of 06:18, 19 September 2015
Short description: | p9@SGK223 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SGK223_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -113bp_to_ENST00000520004_5end |
EntrezGene: | SGK223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
cardiac fibroblast | 9.07e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
cardiocyte | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |