FFCP PHASE1:Hg19::chr3:101575858..101575869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64332 | |EntrezGene=64332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29805 | |HGNC=29805 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_ENST00000495719_5end | |association_with_transcript=-174bp_to_ENST00000495719_5end | ||
|cluster_id=chr3:101575858..101575869,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_13_at_NFKBIZ_5end | |description=CAGE_peak_13_at_NFKBIZ_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002087!1.41e-10!119;CL:0002031!1.63e-10!124;CL:0000738!5.60e-10!140;CL:0002057!1.74e-09!42;CL:0000860!1.63e-08!45;CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0000839!1.04e-07!70;CL:0000557!1.62e-07!71;CL:0002032!1.91e-07!165;CL:0000837!1.91e-07!165;CL:0000766!2.60e-07!76;CL:0000988!3.34e-07!182;CL:0002194!9.51e-07!63;CL:0000576!9.51e-07!63;CL:0000040!9.51e-07!63;CL:0000559!9.51e-07!63 | |ontology_enrichment_celltype=CL:0002087!1.41e-10!119;CL:0002031!1.63e-10!124;CL:0000738!5.60e-10!140;CL:0002057!1.74e-09!42;CL:0000860!1.63e-08!45;CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0000839!1.04e-07!70;CL:0000557!1.62e-07!71;CL:0002032!1.91e-07!165;CL:0000837!1.91e-07!165;CL:0000766!2.60e-07!76;CL:0000988!3.34e-07!182;CL:0002194!9.51e-07!63;CL:0000576!9.51e-07!63;CL:0000040!9.51e-07!63;CL:0000559!9.51e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.95e-13;6!CL:0002397;4.95e-13;6!CL:0000860;3.81e-12;33!CL:0002057;3.81e-12;33!CL:0000766;6.95e-12;69!CL:0000576;1.18e-10;48!CL:0000473;2.01e-10;39!CL:0000234;2.01e-10;39!CL:1000415;2.85e-10;2 | |ontology_enrichment_celltype_v019=CL:0002393;4.95e-13;6!CL:0002397;4.95e-13;6!CL:0000860;3.81e-12;33!CL:0002057;3.81e-12;33!CL:0000766;6.95e-12;69!CL:0000576;1.18e-10;48!CL:0000473;2.01e-10;39!CL:0000234;2.01e-10;39!CL:1000415;2.85e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.80e-21,42;CL:0002057,7.80e-21,42;CL:0000473,3.34e-18,48;CL:0000234,3.34e-18,48;CL:0002194,1.65e-14,59;CL:0000576,1.65e-14,59;CL:0000040,1.65e-14,59;CL:0000559,1.65e-14,59;CL:0002009,4.94e-14,61;CL:0000839,5.80e-13,66;CL:0000557,9.09e-13,67;CL:0000766,7.16e-12,72;CL:1000415,2.72e-10,2;CL:0002393,5.87e-09,9;CL:0002397,5.87e-09,9;CL:0000763,7.94e-08,108;CL:0000049,7.94e-08,108;CL:0002087,2.50e-07,115;CL:0002031,5.23e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-14;42 | |ontology_enrichment_development_v019=CL:0002057;1.99e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.42e-07!112 | |ontology_enrichment_uberon=UBERON:0002193!3.42e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002110;2.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.08e-11,76;UBERON:0001474,2.12e-10,82;UBERON:0004765,1.87e-09,90;UBERON:0002405,3.86e-09,93;UBERON:0002390,1.17e-08,98;UBERON:0003061,1.17e-08,98;UBERON:0001434,1.77e-08,100;UBERON:0002193,7.94e-08,108;UBERON:0002110,2.79e-07,3;UBERON:0006242,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,1.00272223735071,3.68918480216948,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0.575384784644301,0.768482119587302,0,5.5159308917859,0,0,0.188242339542605,0,0,6.12167784741805,0,2.55734850319616,0,0,0,2.32167390902867,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0,0,1.58231193720442,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0.473447805734733,1.94826728407911,0,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0.211125408127993,0,0.828851746593443,0.251932747854276,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,1.36885967914362,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0.778619813244484,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.671132590786754,0,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,1.07132363163395,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p13@NFKBIZ | |short_description=p13@NFKBIZ | ||
}} | }} |
Latest revision as of 07:38, 19 September 2015
Short description: | p13@NFKBIZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NFKBIZ_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -174bp_to_ENST00000495719_5end |
EntrezGene: | NFKBIZ |
HGNC: | 29805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.80e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.80e-21 | 42 |
defensive cell | 3.34e-18 | 48 |
phagocyte | 3.34e-18 | 48 |
monopoietic cell | 1.65e-14 | 59 |
monocyte | 1.65e-14 | 59 |
monoblast | 1.65e-14 | 59 |
promonocyte | 1.65e-14 | 59 |
macrophage dendritic cell progenitor | 4.94e-14 | 61 |
myeloid lineage restricted progenitor cell | 5.80e-13 | 66 |
granulocyte monocyte progenitor cell | 9.09e-13 | 67 |
myeloid leukocyte | 7.16e-12 | 72 |
epithelial cell of gall bladder | 2.72e-10 | 2 |
intermediate monocyte | 5.87e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.87e-09 | 9 |
myeloid cell | 7.94e-08 | 108 |
common myeloid progenitor | 7.94e-08 | 108 |
nongranular leukocyte | 2.50e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.23e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.08e-11 | 76 |
bone element | 2.12e-10 | 82 |
skeletal element | 1.87e-09 | 90 |
immune system | 3.86e-09 | 93 |
hematopoietic system | 1.17e-08 | 98 |
blood island | 1.17e-08 | 98 |
skeletal system | 1.77e-08 | 100 |
hemolymphoid system | 7.94e-08 | 108 |
gallbladder | 2.79e-07 | 3 |
gall bladder primordium | 2.79e-07 | 3 |