FFCP PHASE1:Hg19::chr18:3262148..3262187,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3262148..3262187,+
|short_description=p2@MYL12B
|description=CAGE_peak_2_at_MYL12B_5end
|association_with_transcript=37bp_to_NM_033546,uc002klt.3_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=103910 | |EntrezGene=103910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29827 | |HGNC=29827 | ||
|TSSclassifier=strong | |||
|UniProt=O14950 | |UniProt=O14950 | ||
|association_with_transcript=37bp_to_NM_033546,uc002klt.3_5end | |||
|cluster_id=chr18:3262148..3262187,+ | |||
|description=CAGE_peak_2_at_MYL12B_5end | |||
|id=chr18:3262148..3262187,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.79e-32!682;CL:0000548!1.33e-31!679;CL:0000004!1.33e-31!679;CL:0000255!1.33e-31!679;CL:0000003!8.00e-30!722;CL:0000063!5.86e-25!578;CL:0000144!2.96e-23!625;CL:0002371!3.53e-21!591;CL:0000222!2.57e-16!119;CL:0000220!2.65e-14!246;CL:0002139!2.91e-14!24;CL:0002321!9.53e-14!248;CL:0000066!5.96e-13!254;CL:0000213!6.69e-12!57;CL:0000215!6.69e-12!57;CL:0000076!7.25e-12!62;CL:0000071!7.76e-11!18;CL:0002546!7.76e-11!18;CL:0000723!1.23e-09!436;CL:0000048!1.92e-09!430;CL:0000034!5.86e-09!444;CL:0000359!2.62e-08!32;CL:0000115!2.38e-07!35;CL:0002078!3.24e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.85e-14;24!CL:0000071;7.64e-11;18!CL:0000359;6.37e-08;32!CL:0000213;3.69e-07;58!CL:0000215;3.69e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.16e-16,121;CL:0002139,2.91e-14,24;CL:0002321,9.09e-14,250;CL:0000066,4.18e-13,253;CL:0000076,2.56e-12,63;CL:0000213,4.32e-12,58;CL:0000215,4.32e-12,58;CL:0000071,7.76e-11,18;CL:0002546,7.76e-11,18;CL:0000723,2.60e-09,433;CL:0000048,4.01e-09,427;CL:0000034,1.21e-08,441;CL:0000359,2.62e-08,32;CL:0000115,1.57e-07,36;CL:0002078,2.14e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;7.64e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.37e-15!69;UBERON:0001981!8.96e-15!60;UBERON:0007500!8.96e-15!60;UBERON:0004537!8.96e-15!60;UBERON:0006965!8.96e-15!60;UBERON:0002049!3.89e-14!79;UBERON:0007798!3.89e-14!79;UBERON:0004872!9.07e-14!84;UBERON:0001637!3.06e-13!42;UBERON:0003509!3.06e-13!42;UBERON:0004572!3.06e-13!42;UBERON:0004535!7.44e-12!110;UBERON:0001986!7.76e-11!18;UBERON:0004638!7.76e-11!18;UBERON:0004852!7.76e-11!18;UBERON:0001009!1.11e-10!113;UBERON:0004573!4.78e-10!33;UBERON:0004571!4.78e-10!33;UBERON:0000487!4.43e-09!22;UBERON:0003914!6.12e-09!118;UBERON:0006914!1.09e-08!25;UBERON:0000490!1.53e-08!138;UBERON:0000926!5.06e-08!448;UBERON:0004120!5.06e-08!448;UBERON:0006603!5.06e-08!448;UBERON:0000947!1.16e-07!21;UBERON:0010191!1.16e-07!21;UBERON:0003081!2.90e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.64e-11;18!UBERON:0001986;7.64e-11;18!UBERON:0004852;7.64e-11;18!UBERON:0001637;7.19e-10;42!UBERON:0003509;7.19e-10;42!UBERON:0004572;7.19e-10;42!UBERON:0007500;8.57e-10;56!UBERON:0001981;8.57e-10;56!UBERON:0004537;8.57e-10;56!UBERON:0004573;2.35e-09;33!UBERON:0004571;2.35e-09;33!UBERON:0000487;4.33e-09;22!UBERON:0006914;1.07e-08;25!UBERON:0000490;1.16e-08;33!UBERON:0000055;1.27e-08;65!UBERON:0000947;1.18e-07;21!UBERON:0010191;1.18e-07;21!UBERON:0002049;3.48e-07;75!UBERON:0007798;3.48e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,8.49e-15,68;UBERON:0007500,2.29e-14,59;UBERON:0001981,2.29e-14,59;UBERON:0004537,2.29e-14,59;UBERON:0006965,2.29e-14,59;UBERON:0002049,9.37e-14,78;UBERON:0007798,9.37e-14,78;UBERON:0004872,2.14e-13,83;UBERON:0001637,3.06e-13,42;UBERON:0003509,3.06e-13,42;UBERON:0004572,3.06e-13,42;UBERON:0004535,1.59e-11,109;UBERON:0004638,7.76e-11,18;UBERON:0001986,7.76e-11,18;UBERON:0004852,7.76e-11,18;UBERON:0001009,2.29e-10,112;UBERON:0004573,4.78e-10,33;UBERON:0004571,4.78e-10,33;UBERON:0003914,3.95e-09,117;UBERON:0000487,4.43e-09,22;UBERON:0006914,1.09e-08,25;UBERON:0000926,1.14e-08,315;UBERON:0004120,1.14e-08,315;UBERON:0006603,1.14e-08,315;UBERON:0000490,2.07e-08,148;UBERON:0000947,1.16e-07,21;UBERON:0010191,1.16e-07,21;UBERON:0003081,3.36e-07,203 | |||
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| ||
|short_description=p2@MYL12B | |||
}} | }} |
Latest revision as of 08:19, 19 September 2015
Short description: | p2@MYL12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYL12B_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_NM_033546, uc002klt.3_5end |
EntrezGene: | MYL12B |
HGNC: | 29827 |
UniProt: | O14950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.16e-16 | 121 |
endothelial cell of vascular tree | 2.91e-14 | 24 |
embryonic cell | 9.09e-14 | 250 |
epithelial cell | 4.18e-13 | 253 |
squamous epithelial cell | 2.56e-12 | 63 |
lining cell | 4.32e-12 | 58 |
barrier cell | 4.32e-12 | 58 |
blood vessel endothelial cell | 7.76e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.76e-11 | 18 |
somatic stem cell | 2.60e-09 | 433 |
multi fate stem cell | 4.01e-09 | 427 |
stem cell | 1.21e-08 | 441 |
vascular associated smooth muscle cell | 2.62e-08 | 32 |
endothelial cell | 1.57e-07 | 36 |
meso-epithelial cell | 2.14e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
vessel | 8.49e-15 | 68 |
epithelial tube open at both ends | 2.29e-14 | 59 |
blood vessel | 2.29e-14 | 59 |
blood vasculature | 2.29e-14 | 59 |
vascular cord | 2.29e-14 | 59 |
vasculature | 9.37e-14 | 78 |
vascular system | 9.37e-14 | 78 |
splanchnic layer of lateral plate mesoderm | 2.14e-13 | 83 |
artery | 3.06e-13 | 42 |
arterial blood vessel | 3.06e-13 | 42 |
arterial system | 3.06e-13 | 42 |
cardiovascular system | 1.59e-11 | 109 |
blood vessel endothelium | 7.76e-11 | 18 |
endothelium | 7.76e-11 | 18 |
cardiovascular system endothelium | 7.76e-11 | 18 |
circulatory system | 2.29e-10 | 112 |
systemic artery | 4.78e-10 | 33 |
systemic arterial system | 4.78e-10 | 33 |
epithelial tube | 3.95e-09 | 117 |
simple squamous epithelium | 4.43e-09 | 22 |
squamous epithelium | 1.09e-08 | 25 |
mesoderm | 1.14e-08 | 315 |
mesoderm-derived structure | 1.14e-08 | 315 |
presumptive mesoderm | 1.14e-08 | 315 |
unilaminar epithelium | 2.07e-08 | 148 |
aorta | 1.16e-07 | 21 |
aortic system | 1.16e-07 | 21 |
lateral plate mesoderm | 3.36e-07 | 203 |