FFCP PHASE1:Hg19::chr14:23526739..23526766,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64403 | |EntrezGene=64403 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14265 | |HGNC=14265 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UP0,E7EMU3 | |UniProt=Q86UP0,E7EMU3 | ||
|association_with_transcript=0bp_to_ENST00000397359,ENST00000422751,ENST00000487137,NM_022478,NM_144985,uc001wil.2,uc001win.3,uc010akf.2_5end | |association_with_transcript=0bp_to_ENST00000397359,ENST00000422751,ENST00000487137,NM_022478,NM_144985,uc001wil.2,uc001win.3,uc010akf.2_5end | ||
|cluster_id=chr14:23526739..23526766,- | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_2_at_CDH24_5end | |description=CAGE_peak_2_at_CDH24_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.06e-20!254;CL:0002321!4.91e-12!248;CL:0000220!7.23e-12!246;CL:0000133!3.53e-09!59;CL:0000221!6.18e-08!71;CL:0000055!9.92e-08!180;CL:0002319!1.75e-07!25;CL:0000333!4.86e-07!41 | |ontology_enrichment_celltype=CL:0000066!1.06e-20!254;CL:0002321!4.91e-12!248;CL:0000220!7.23e-12!246;CL:0000133!3.53e-09!59;CL:0000221!6.18e-08!71;CL:0000055!9.92e-08!180;CL:0002319!1.75e-07!25;CL:0000333!4.86e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.51e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.51e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.48e-20,253;CL:0002321,4.80e-12,250;CL:0000133,5.00e-09,59;CL:0002319,1.36e-07,25;CL:0000221,1.91e-07,72;CL:0000333,7.53e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.22e-16!143;DOID:305!8.54e-13!106;DOID:162!9.30e-13!235;DOID:14566!1.80e-12!239 | |ontology_enrichment_disease=DOID:0050687!1.22e-16!143;DOID:305!8.54e-13!106;DOID:162!9.30e-13!235;DOID:14566!1.80e-12!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.70e-16,143;DOID:305,1.35e-12,106;DOID:162,3.08e-12,235;DOID:14566,5.83e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0000064!3.05e-13!219;UBERON:0000119!1.50e-12!312;UBERON:0000481!4.58e-12!347;UBERON:0000483!7.21e-12!309;UBERON:0000475!8.15e-12!365;UBERON:0000477!8.05e-09!286;UBERON:0000924!1.69e-08!173;UBERON:0006601!1.69e-08!173;UBERON:0004121!2.53e-08!169;UBERON:0000073!6.84e-08!94;UBERON:0001016!6.84e-08!94;UBERON:0005743!1.90e-07!86;UBERON:0000063!3.08e-07!97;UBERON:0000025!7.84e-07!194;UBERON:0001017!7.93e-07!82 | |ontology_enrichment_uberon=UBERON:0000064!3.05e-13!219;UBERON:0000119!1.50e-12!312;UBERON:0000481!4.58e-12!347;UBERON:0000483!7.21e-12!309;UBERON:0000475!8.15e-12!365;UBERON:0000477!8.05e-09!286;UBERON:0000924!1.69e-08!173;UBERON:0006601!1.69e-08!173;UBERON:0004121!2.53e-08!169;UBERON:0000073!6.84e-08!94;UBERON:0001016!6.84e-08!94;UBERON:0005743!1.90e-07!86;UBERON:0000063!3.08e-07!97;UBERON:0000025!7.84e-07!194;UBERON:0001017!7.93e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,9.10e-12,309;UBERON:0000483,4.21e-11,306;UBERON:0011216,3.01e-09,223;UBERON:0004121,3.17e-07,171;UBERON:0000924,3.17e-07,171;UBERON:0006601,3.17e-07,171;UBERON:0001016,4.37e-07,89 | |||
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| ||
|short_description=p2@CDH24 | |short_description=p2@CDH24 | ||
}} | }} |
Latest revision as of 08:43, 19 September 2015
Short description: | p2@CDH24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH24_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000397359, ENST00000422751, ENST00000487137, NM_022478, NM_144985, uc001wil.2, uc001win.3, uc010akf.2_5end |
EntrezGene: | CDH24 |
HGNC: | 14265 |
UniProt: | Q86UP0E7EMU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.48e-20 | 253 |
embryonic cell | 4.80e-12 | 250 |
neurectodermal cell | 5.00e-09 | 59 |
neural cell | 1.36e-07 | 25 |
ectodermal cell | 1.91e-07 | 72 |
migratory neural crest cell | 7.53e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell layer | 9.10e-12 | 309 |
epithelium | 4.21e-11 | 306 |
organ system subdivision | 3.01e-09 | 223 |
ectoderm-derived structure | 3.17e-07 | 171 |
ectoderm | 3.17e-07 | 171 |
presumptive ectoderm | 3.17e-07 | 171 |
nervous system | 4.37e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.70e-16 | 143 |
carcinoma | 1.35e-12 | 106 |
cancer | 3.08e-12 | 235 |
disease of cellular proliferation | 5.83e-12 | 239 |