FFCP PHASE1:Hg19::chr12:56324933..56324982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1606 | |EntrezGene=1606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2849 | |HGNC=2849 | ||
|TSSclassifier=strong | |||
|UniProt=G3V312,G3V4E1,P23743 | |UniProt=G3V312,G3V4E1,P23743 | ||
|association_with_transcript=0bp_to_ENST00000547324,ENST00000548479,ENST00000549629,ENST00000555218,NM_001345,uc001sih.1,uc001sii.1,uc001sij.2,uc009zoc.1,uc009zod.1_5end | |association_with_transcript=0bp_to_ENST00000547324,ENST00000548479,ENST00000549629,ENST00000555218,NM_001345,uc001sih.1,uc001sii.1,uc001sij.2,uc009zoc.1,uc009zod.1_5end | ||
|cluster_id=chr12:56324933..56324982,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_DGKA_5end | |description=CAGE_peak_2_at_DGKA_5end | ||
|id=chr12:56324933..56324982,+ | |id=chr12:56324933..56324982,+ | ||
|ontology_enrichment_celltype=CL:0000542!7.42e-27!53;CL:0000051!7.42e-27!53;CL:0000838!1.96e-26!52;CL:0000084!1.76e-15!25;CL:0000827!1.76e-15!25;CL:0000738!1.72e-13!140;CL:0000791!2.59e-12!18;CL:0000789!2.59e-12!18;CL:0002420!2.59e-12!18;CL:0002419!2.59e-12!18;CL:0000790!2.59e-12!18;CL:0000988!3.94e-12!182;CL:0000037!1.50e-11!172;CL:0000566!1.50e-11!172;CL:0000945!1.17e-10!24;CL:0000826!1.17e-10!24;CL:0002087!1.46e-10!119;CL:0002032!1.19e-09!165;CL:0000837!1.19e-09!165;CL:0002031!2.90e-08!124;CL:0000625!3.60e-08!11;CL:0000236!9.53e-08!14 | |ontology_enrichment_celltype=CL:0000542!7.42e-27!53;CL:0000051!7.42e-27!53;CL:0000838!1.96e-26!52;CL:0000084!1.76e-15!25;CL:0000827!1.76e-15!25;CL:0000738!1.72e-13!140;CL:0000791!2.59e-12!18;CL:0000789!2.59e-12!18;CL:0002420!2.59e-12!18;CL:0002419!2.59e-12!18;CL:0000790!2.59e-12!18;CL:0000988!3.94e-12!182;CL:0000037!1.50e-11!172;CL:0000566!1.50e-11!172;CL:0000945!1.17e-10!24;CL:0000826!1.17e-10!24;CL:0002087!1.46e-10!119;CL:0002032!1.19e-09!165;CL:0000837!1.19e-09!165;CL:0002031!2.90e-08!124;CL:0000625!3.60e-08!11;CL:0000236!9.53e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.41e-16;53!CL:0000084;5.01e-16;25!CL:0000791;9.79e-13;18!CL:0000789;9.79e-13;18!CL:0002419;9.79e-13;18!CL:0000945;4.93e-11;24!CL:0000625;1.97e-08;11!CL:0000236;8.51e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.62e-27,53;CL:0000051,1.62e-27,53;CL:0000838,4.41e-27,52;CL:0000084,7.64e-16,25;CL:0000827,7.64e-16,25;CL:0000738,1.72e-14,136;CL:0000988,1.31e-12,177;CL:0000791,1.36e-12,18;CL:0000789,1.36e-12,18;CL:0002420,1.36e-12,18;CL:0002419,1.36e-12,18;CL:0000790,1.36e-12,18;CL:0000037,7.27e-12,168;CL:0002087,1.86e-11,115;CL:0000945,6.77e-11,24;CL:0000826,6.77e-11,24;CL:0002032,6.69e-10,161;CL:0000837,6.69e-10,161;CL:0002031,6.26e-09,120;CL:0000625,2.42e-08,11;CL:0000236,6.57e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.41e-16;53!CL:0000790;9.79e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.89e-09!15;UBERON:0000179!2.89e-09!15;UBERON:0000463!2.89e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.45e-09;15!UBERON:0000179;1.45e-09;15!UBERON:0000463;1.45e-09;15!UBERON:0002390;1.19e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.82e-09,15;UBERON:0000179,1.82e-09,15;UBERON:0000463,1.82e-09,15 | |||
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| ||
|short_description=p2@DGKA | |short_description=p2@DGKA | ||
}} | }} |
Latest revision as of 08:46, 19 September 2015
Short description: | p2@DGKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DGKA_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000547324, ENST00000548479, ENST00000549629, ENST00000555218, NM_001345, uc001sih.1, uc001sii.1, uc001sij.2, uc009zoc.1, uc009zod.1_5end |
EntrezGene: | DGKA |
HGNC: | 2849 |
UniProt: | G3V312G3V4E1P23743 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.62e-27 | 53 |
common lymphoid progenitor | 1.62e-27 | 53 |
lymphoid lineage restricted progenitor cell | 4.41e-27 | 52 |
T cell | 7.64e-16 | 25 |
pro-T cell | 7.64e-16 | 25 |
leukocyte | 1.72e-14 | 136 |
hematopoietic cell | 1.31e-12 | 177 |
mature alpha-beta T cell | 1.36e-12 | 18 |
alpha-beta T cell | 1.36e-12 | 18 |
immature T cell | 1.36e-12 | 18 |
mature T cell | 1.36e-12 | 18 |
immature alpha-beta T cell | 1.36e-12 | 18 |
hematopoietic stem cell | 7.27e-12 | 168 |
nongranular leukocyte | 1.86e-11 | 115 |
lymphocyte of B lineage | 6.77e-11 | 24 |
pro-B cell | 6.77e-11 | 24 |
hematopoietic oligopotent progenitor cell | 6.69e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.69e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 6.26e-09 | 120 |
CD8-positive, alpha-beta T cell | 2.42e-08 | 11 |
B cell | 6.57e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 1.82e-09 | 15 |
haemolymphatic fluid | 1.82e-09 | 15 |
organism substance | 1.82e-09 | 15 |